| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_0458 |
|---|
| Symbol | |
|---|
| ID | 8379644 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Jonesia denitrificans DSM 20603 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013174 |
|---|
| Strand | + |
|---|
| Start bp | 480890 |
|---|
| End bp | 482707 |
|---|
| Gene Length | 1818 bp |
|---|
| Protein Length | 605 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 645003191 |
|---|
| Product | serine/threonine protein kinase |
|---|
| Protein accession | YP_003160426 |
|---|
| Protein GI | 256831699 |
|---|
| COG category | [K] Transcription
[L] Replication, recombination and repair
[R] General function prediction only
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0515] Serine/threonine protein kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGGAC GTCGGCAACC ATCACTGCCC CCCAAAATCC CCGGCTTCGA ATACGTCGGG
CTCCTGGGTA TGGGCGGATT TGCTGACGTC TTCGAATATC GCCAAGACTT CCCACGACGC
CCCGTAGCCG TCAAAGTACT GCTGTCCACC TCACTGGATG CCGGCGCGCG GGACGCGTTC
TTCGCAGAAG CCAACATCAT GGCGCGCCTG TCCCAGCACC CATCAATTGT CACGATCCAC
CAAGCAGCGA TCGCATCAGA CGGGCGCCCC TACTTCGTCA TGGAGTTCTG TGCGAAACCA
TCGCTCGGCG CACGATTCCG ATCCGAACGC ATCTCCGTTG CAGAAACCCT ACGCACGGGG
GTGAGGGTCG CATCGGCAGT AGAAACAGCA CACCGATCAG GTGTGCTCCA CCGCGACATC
AAACCCGCGA ACATCCTCGC CACCGACTTC GGGTGGCCCG CCCTCACAGA CTTTGGGATC
GCCGGTGCAG TGGGGGACAA ACTTGCTGCA GCTGGCATGT CCATCCCATG GGCGCCACCA
GAAATGCTCC TTGACGAACC CTACGGCGAC GCACGCTCAG ACGTGTACTC ACTGGGCGCA
ACCCTCTACA CGCTCCTAGC CGGTCGGTCA CCCTTTGAAA TCCCAGGACA AACCAACAGC
CCCACCGACC TCATCACCCG AATCGAACGC ACCCAACTCC CCGCCATCGG GAGAGTCGAT
GTCCCAGAGG AACTGGAGTC GGTGCTATCG CGGGCCATGT CACGCGACCC GAACCACCGA
TTCTCCTCCG CGCTCGCATT CGCGCACGCC CTGCAAGGCA TAGAACGCCA ACTTCAACTC
CCAGTCACCG GTGTTGACGT TCCAGACATT GTTCCCAGCG CCCCAGCAAC CTCAGCATCA
TCACCACCCA AAGCCTCCTC CGAACGGTCT GTGACCGTTG TGCGAGGTCA GGATTCCTCC
CAACCACCAC AAACGAGTGG CCCACTTCCC ACCTCCTTCG CGCCCTCGGC CCCGTCCGCG
CCACCTGCAC CTGACACCAC AAACTCCCCG CACATCGTCG ATACCGGCGT AGACCCAACT
GGCCAAGAGG ATATTGCCAC CCGCATGCGT AGCGTCTCCA CCATCCACCC GGATGTGGAC
GAAGCTGAAC GGGAAACGCG GTTGCGGCCC ATCACAACGG TTCCCGCCCA CCCCGATGCC
CCACTTACTC CCGGACCCTC ACCGGAATTG GGTGGTCTCG GGCAACGCAG TGCACAAGGA
CCAACCTGGT CCGCGCAACG AGCAACCAGG CAGCACGAAC ACAGCTTCGA ACCACGCACA
TTCGAGGACA CCGACGACCG CGCCCCTGAC TTCTACGATG CAGTACGGGG ACAACAGCCA
GCAGGTCAAC GCCGACAACG TCGTGGGCGG GTTGTCGCCA CCGTTGTGTC GTTGCTCGCG
ATCATAGCCA TTCTTGTTGT CATCGGGCAG AATATGATCA ACAACGATGC GGTGAACGAG
AACGACACAG ACCCGGTGTA CAACGACACG CAAGATCTCA ACATGACGGA ATCGGTTCCG
TCAGTCATTA ATCTCCGGGT CGCTCAATCG AGTTCATCGT CTGTCACGTT CGCCTGGGAC
AACCCACAAC CAGCTCAGGG CGATAGTTAT GTGTGGCGGA TCGTTGATGT GGACGGGAGC
GGCACCCCCA CGCGCACTCA GGCCCCCCTT GCCCAAATCC CTCTTGTGGG CGGGCAAGAA
TCCGTGTGTA TTGAGGTGTC CCTCGTTCGC GAGAACGGGA AAGCGTCAAC AACACCAACA
AGGGAGTGCA GTCAGTGA
|
|---|
| Protein sequence | MSGRRQPSLP PKIPGFEYVG LLGMGGFADV FEYRQDFPRR PVAVKVLLST SLDAGARDAF
FAEANIMARL SQHPSIVTIH QAAIASDGRP YFVMEFCAKP SLGARFRSER ISVAETLRTG
VRVASAVETA HRSGVLHRDI KPANILATDF GWPALTDFGI AGAVGDKLAA AGMSIPWAPP
EMLLDEPYGD ARSDVYSLGA TLYTLLAGRS PFEIPGQTNS PTDLITRIER TQLPAIGRVD
VPEELESVLS RAMSRDPNHR FSSALAFAHA LQGIERQLQL PVTGVDVPDI VPSAPATSAS
SPPKASSERS VTVVRGQDSS QPPQTSGPLP TSFAPSAPSA PPAPDTTNSP HIVDTGVDPT
GQEDIATRMR SVSTIHPDVD EAERETRLRP ITTVPAHPDA PLTPGPSPEL GGLGQRSAQG
PTWSAQRATR QHEHSFEPRT FEDTDDRAPD FYDAVRGQQP AGQRRQRRGR VVATVVSLLA
IIAILVVIGQ NMINNDAVNE NDTDPVYNDT QDLNMTESVP SVINLRVAQS SSSSVTFAWD
NPQPAQGDSY VWRIVDVDGS GTPTRTQAPL AQIPLVGGQE SVCIEVSLVR ENGKASTTPT
RECSQ
|
|---|
| |