Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jden_0453 |
Symbol | |
ID | 8379639 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jonesia denitrificans DSM 20603 |
Kingdom | Bacteria |
Replicon accession | NC_013174 |
Strand | + |
Start bp | 476324 |
End bp | 477064 |
Gene Length | 741 bp |
Protein Length | 246 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 645003186 |
Product | regulatory protein GntR HTH |
Protein accession | YP_003160421 |
Protein GI | 256831694 |
COG category | [K] Transcription |
COG ID | [COG2186] Transcriptional regulators |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0156183 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCAGACCT ATGAGACCGT CCTTTCTCGC ATCGAAACAG GACTCGCAGA AGGCCGGTGG CAGCTGGGGG ACCACCTCCC TTCCGAACGC GCACTCGCCG AAGAATTCGC TGTCTCGAGA GCCTCAATTC GAGAAGCGCT CCGCGTCCTG GAAGCGATGG GCATTATTCG CAGAGGAACC GGATCAGGGC CAGACGCGGG AGCGATCCTC ATTGACCGTC CCGCCGCCGG ACTCGGCGCA GCCATCAAAC TTCACCTCGC ATCGGGTGCC ATGCCCGTCC ACGACGTGGT CCAAATGCGA CTACTCATCG AAACATGGGC AGCACAAAAC GTAGCTATGC GCTGTGCGGC GGAAAGCCTC CACAACCAAG CCGACGCCAC ACAACCTGCG CAGACATGCC TCACCCGAGC GCTCGCGCTC CTTGAGGACA TGGAAGCAAG TGCACTGAAC CACGAAGAGT TCCAACGCCT TGACGCAGAA TTCCATGTCG AACTTGTCGC ACTAGCAGGA AACACTCTGT GCGAAGCAAC AATGCTTGGA CTGCGTCAAG CCATTGCTGA CTATGTTGCT GCAGGCAGCG CTCGTCTTGA CGATTGGCAA AGTCTGGCAC ACACACTCAT GAACGAGCAC CGCCACATCA TCTCTTCACT GCAAGAAGGC GATGCGACTG GGGCGGCAAC AGCGGTGGAA CAGCACATTG AGGGGTTCTA TCGGCGCGCA CTAGGTCAAC GCACCACCTA G
|
Protein sequence | MQTYETVLSR IETGLAEGRW QLGDHLPSER ALAEEFAVSR ASIREALRVL EAMGIIRRGT GSGPDAGAIL IDRPAAGLGA AIKLHLASGA MPVHDVVQMR LLIETWAAQN VAMRCAAESL HNQADATQPA QTCLTRALAL LEDMEASALN HEEFQRLDAE FHVELVALAG NTLCEATMLG LRQAIADYVA AGSARLDDWQ SLAHTLMNEH RHIISSLQEG DATGAATAVE QHIEGFYRRA LGQRTT
|
| |