Gene Jden_0453 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJden_0453 
Symbol 
ID8379639 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJonesia denitrificans DSM 20603 
KingdomBacteria 
Replicon accessionNC_013174 
Strand
Start bp476324 
End bp477064 
Gene Length741 bp 
Protein Length246 aa 
Translation table11 
GC content59% 
IMG OID645003186 
Productregulatory protein GntR HTH 
Protein accessionYP_003160421 
Protein GI256831694 
COG category[K] Transcription 
COG ID[COG2186] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0156183 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGACCT ATGAGACCGT CCTTTCTCGC ATCGAAACAG GACTCGCAGA AGGCCGGTGG 
CAGCTGGGGG ACCACCTCCC TTCCGAACGC GCACTCGCCG AAGAATTCGC TGTCTCGAGA
GCCTCAATTC GAGAAGCGCT CCGCGTCCTG GAAGCGATGG GCATTATTCG CAGAGGAACC
GGATCAGGGC CAGACGCGGG AGCGATCCTC ATTGACCGTC CCGCCGCCGG ACTCGGCGCA
GCCATCAAAC TTCACCTCGC ATCGGGTGCC ATGCCCGTCC ACGACGTGGT CCAAATGCGA
CTACTCATCG AAACATGGGC AGCACAAAAC GTAGCTATGC GCTGTGCGGC GGAAAGCCTC
CACAACCAAG CCGACGCCAC ACAACCTGCG CAGACATGCC TCACCCGAGC GCTCGCGCTC
CTTGAGGACA TGGAAGCAAG TGCACTGAAC CACGAAGAGT TCCAACGCCT TGACGCAGAA
TTCCATGTCG AACTTGTCGC ACTAGCAGGA AACACTCTGT GCGAAGCAAC AATGCTTGGA
CTGCGTCAAG CCATTGCTGA CTATGTTGCT GCAGGCAGCG CTCGTCTTGA CGATTGGCAA
AGTCTGGCAC ACACACTCAT GAACGAGCAC CGCCACATCA TCTCTTCACT GCAAGAAGGC
GATGCGACTG GGGCGGCAAC AGCGGTGGAA CAGCACATTG AGGGGTTCTA TCGGCGCGCA
CTAGGTCAAC GCACCACCTA G
 
Protein sequence
MQTYETVLSR IETGLAEGRW QLGDHLPSER ALAEEFAVSR ASIREALRVL EAMGIIRRGT 
GSGPDAGAIL IDRPAAGLGA AIKLHLASGA MPVHDVVQMR LLIETWAAQN VAMRCAAESL
HNQADATQPA QTCLTRALAL LEDMEASALN HEEFQRLDAE FHVELVALAG NTLCEATMLG
LRQAIADYVA AGSARLDDWQ SLAHTLMNEH RHIISSLQEG DATGAATAVE QHIEGFYRRA
LGQRTT