Gene Jden_0448 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJden_0448 
Symbol 
ID8379634 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJonesia denitrificans DSM 20603 
KingdomBacteria 
Replicon accessionNC_013174 
Strand
Start bp470437 
End bp471582 
Gene Length1146 bp 
Protein Length381 aa 
Translation table11 
GC content60% 
IMG OID645003181 
Productglycosyl transferase group 1 
Protein accessionYP_003160416 
Protein GI256831689 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.504069 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCACCA ACCCCACCCC ACTGACCATC GGTCTTGTCA TCGACGACTC ACTCGACCGA 
CCCGATGGAG TCCAACAGCA CGTCCTCACA CTCGGTCGCT GGCTCACCGG AAAAGGCCAC
ACCGTTCACT ACCTCACCTC CACCACCCAA CGCACCGACA TCCCCCGCAT CCACTCACTA
GCAAAAAACC TTCCCATCAC CTTCAACGGC AACAGGCTCG GCATCCCCTT ACCCGCTGAC
CGATCGGCGA TCCGGCAGCT TTTTACCGAC GTCCACTTTG ACGTCCTGCA CATCAACATG
CCCTACAGTC CCCTGCTCGC CGGTGCCATC ATCAACGCCG CACCAGCCAC CACACGCATT
GTGGGAACGT TCCACATCAT GCCGTGGTCA ACCCTCACCA AGGTAGGAAC CCACGCACTG
GGGGCAATCC AACGCCGTCA ACTCACACGC TTCCACGAGA TCATTGCCGT CTCCCAACCC
GCCGCCGACT TCGCCACCAC CGCACTGCAC GTCACCCCCA CCATTATCGG GAACCCCGTG
CGGATGCTTG GCTTCAACCA AGCACGAGAA GCAGAACTGA ACCAATCTGC GGAACTGTCC
GCGAACGAAC GCGTTCGGAT CTTCTTCCTC GGCCGCCTAG TGGAACGCAA AGGCGCAGGA
GAACTCCTCA AAGCCGCCGT TCGGCTACGA GAGATCACCA CCACCCCCTT TGAACTGGTG
ATCGCCGGAA AAGGCCCACT CTTTGACACT TACCTGCGTT ACGTTGCTGA AACCGGACTT
GACGACATCA CCAGCTTCCC CGGGTATATC GCCGAAGACG ACAAGCCCGA ACTTCTCGCT
GCCGCAGACA TCGTTGCGCT TCCCTCCACC GGCGGAGAAA GCTTCGGAAT ATCGGTGGTG
GAGGCACTTG CCGCCTGCCG GGGTGCAGTC ATCGCCGGCG ACAACCCCGG CTACCGAACT
GTCATGGACG GGCTCGACGA CCGACTCGTT GACGCCACCG ACACCGAAGC GTTCGCCCAA
CTGCTTGCCC ACTACGTCGA CAACGCTGAC GCGCGCGCAA CAGCGAGCGC TGAACAGCAC
GAAGCTGCGC AACGCTTCGA TGTGGACTAC ATCGGTCGGC GCGTCCTTGA GATCTACACC
GCGTAA
 
Protein sequence
MTTNPTPLTI GLVIDDSLDR PDGVQQHVLT LGRWLTGKGH TVHYLTSTTQ RTDIPRIHSL 
AKNLPITFNG NRLGIPLPAD RSAIRQLFTD VHFDVLHINM PYSPLLAGAI INAAPATTRI
VGTFHIMPWS TLTKVGTHAL GAIQRRQLTR FHEIIAVSQP AADFATTALH VTPTIIGNPV
RMLGFNQARE AELNQSAELS ANERVRIFFL GRLVERKGAG ELLKAAVRLR EITTTPFELV
IAGKGPLFDT YLRYVAETGL DDITSFPGYI AEDDKPELLA AADIVALPST GGESFGISVV
EALAACRGAV IAGDNPGYRT VMDGLDDRLV DATDTEAFAQ LLAHYVDNAD ARATASAEQH
EAAQRFDVDY IGRRVLEIYT A