Gene Jden_0447 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJden_0447 
Symbol 
ID8379633 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJonesia denitrificans DSM 20603 
KingdomBacteria 
Replicon accessionNC_013174 
Strand
Start bp469960 
End bp470385 
Gene Length426 bp 
Protein Length141 aa 
Translation table11 
GC content61% 
IMG OID645003180 
ProductD-tyrosyl-tRNA(Tyr) deacylase 
Protein accessionYP_003160415 
Protein GI256831688 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1490] D-Tyr-tRNAtyr deacylase 
TIGRFAM ID[TIGR00256] D-tyrosyl-tRNA(Tyr) deacylase 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.310878 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGGGCAA TCCTGCAACG CGCATCGGCA GCCAAAGTCA CCGTCGACTC GGTCACAGTC 
GCAGAATTTG ACCGACAAGG GATCGTGGCA CTGATCGGGG TGACCCACAC TGATACCACC
ACCGACGCCG CCACAATAGC CCGCAAAATC GCGGACCTGC GCATCCTCGA CCACGAACAA
TCAGTGACCG ATGCGCACGC CCCCGTCATT GTGGTCAGCC AATTCACCCT CTACGCCGAT
GTTGCAAAAG GCCGCCGCCC CAGTTGGAAC AACGCAGCCC CTGCCCCCGT TGCCGAACCA
CTGGTCAACG CTGTCGTCAA TGACCTCACC GCCCGCGGGA TCAGCACCTC AACCGGGGTG
TTCGGTGCAC ACATGGATGT TCACCTCACC AACGACGGAC CTGTGACTAT CATCGTGGAC
ACGTAA
 
Protein sequence
MRAILQRASA AKVTVDSVTV AEFDRQGIVA LIGVTHTDTT TDAATIARKI ADLRILDHEQ 
SVTDAHAPVI VVSQFTLYAD VAKGRRPSWN NAAPAPVAEP LVNAVVNDLT ARGISTSTGV
FGAHMDVHLT NDGPVTIIVD T