Gene Jden_0427 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJden_0427 
Symbol 
ID8379613 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJonesia denitrificans DSM 20603 
KingdomBacteria 
Replicon accessionNC_013174 
Strand
Start bp452547 
End bp453404 
Gene Length858 bp 
Protein Length285 aa 
Translation table11 
GC content62% 
IMG OID645003158 
ProductABC transporter related 
Protein accessionYP_003160395 
Protein GI256831668 
COG category[H] Coenzyme transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG1120] ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.713042 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.299152 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACTAGCG CCCCCACCTT ACGTGGACAC GCCCTGACAG TTGGGTATGA CGCCATGGTC 
GTGCTTGACG GCCTTGATGT GACAATCCCC CCAGGTAAAG TCACTGTCAT TGTTGGCGCA
AACGCGTGCG GGAAGTCCAC CCTCCTCAAA GCGCTTGCCC GGTTGATTCC TGTCACCTCG
GGTCACGTCA CCATTGATGG CACTGACACT CAGACAATCG CGCGCCGCGC CCTAGCACGC
ACCCTCGGTG TGCTACCGCA GCACCCCACA GCCCCTGACG GGGTCACCGT TGCTGACCTT
GTTGCCCGCG GCCGCCACCC TCACCGTGGC CTGTTCTCCC GGTGGACTGA CATTGACGAT
GCGGCCGTCA CCTATGCACT GACCGTCACC GCGACCCTCG ACCTCGCCCA CCGGCCCATC
TCAGAACTTT CCGGGGGCCA AAAACAACGG GTGTGGATCG CCATGATCCT CGCCCAAGAC
CCACAACTCA TGTTGTTGGA CGAACCCACT ACCTTCCTCG ACCTCCACCA CCAAGTCGAA
GTCCTTGACC TCCTCAGCGA ACTCAACACC ACCCGCGGAA CAACCATCGT CATGGTCCTG
CACGAACTGA ACCTCGCAGC GCGCTACGCC GACCACCTCA TCATCATGAA AAACGGGCGC
ATCATCGCTC AAGGTGCCCC CGCTGACACC CTGAATGCCA CGACTGTCCA CGACGCATTC
ACCCTCGACG CAGTCGTCAT CAACGACCCG GTAACCGCAA CGCCACTGAT CGTGCCCGGG
CCACCTGCGC ATCGGCCAGC AACGACAGCG CCCACCCACC AGCCCGCCGA CACACCCACA
ACCGTGTCCA CCCCGTAG
 
Protein sequence
MTSAPTLRGH ALTVGYDAMV VLDGLDVTIP PGKVTVIVGA NACGKSTLLK ALARLIPVTS 
GHVTIDGTDT QTIARRALAR TLGVLPQHPT APDGVTVADL VARGRHPHRG LFSRWTDIDD
AAVTYALTVT ATLDLAHRPI SELSGGQKQR VWIAMILAQD PQLMLLDEPT TFLDLHHQVE
VLDLLSELNT TRGTTIVMVL HELNLAARYA DHLIIMKNGR IIAQGAPADT LNATTVHDAF
TLDAVVINDP VTATPLIVPG PPAHRPATTA PTHQPADTPT TVSTP