Gene Jden_0417 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJden_0417 
Symbol 
ID8379603 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJonesia denitrificans DSM 20603 
KingdomBacteria 
Replicon accessionNC_013174 
Strand
Start bp440920 
End bp442056 
Gene Length1137 bp 
Protein Length378 aa 
Translation table11 
GC content55% 
IMG OID645003148 
Producthypothetical protein 
Protein accessionYP_003160385 
Protein GI256831658 
COG category[R] General function prediction only 
COG ID[COG1277] ABC-type transport system involved in multi-copper enzyme maturation, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.716257 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.998447 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACCG TGGACTTACA CGAACCACCC ACCGCTGCTG TGGAACAGCC ACGGCGGTTG 
ACGTGGCATG GGGTGTCCAC TGTGGCACGC CTGGAACTGA TTCAACGGTT GCGATCATCG
CGCTGGAAGA TTGTGCTCGC ACTGTGGTTT GTTGGTGTGG GTGTCATCTG TTTGCTGATC
ACTACAGCAA CCACCTCGAT GACATCGTAT TCGTCAAACG CGACTCCTAT TGGTCAGTGG
ATCTTTGGGA TGAACGTGTT TTTCATTTTG TTCATGGGGT TGCTCGTCAC CCCATCGTTG
GGGTCCACTG CCATTAACGG TGACCGTAAT GGTGGAACTC TCGCGATCTT GCAGGCGAGC
TTGTTGTCAT CGTGGGAGAT CATCCTTGGT AAGTGGTTAG CCGGATGGAC CACCTCACTC
GCGTTCCTCA TTGCCTCACT GCCGTACATC ATTTGGTCAC TAGCTGCAGG CGGAGTGTCT
GTGTGGTCGG TCATTGTGGT GGTAGCGGTC ATGATGTTCA TCTTGGCTGT GGTGTGTGCA
GTCAGTGTGT TCTGGTCCGC GAAGATGGTG AAAACAGCGA CCTCCACGTT AATGAGTTAC
TTCTCTGTTG CTCTTGTGTC GCTGATTTCG TTGCTGCTGT TTGGGTTGGG TCTTGTGGTC
ATTCAACACG ACACTCAGGT GCGGGTCATG CAACCCAGCG AGTGGTCTCC AACAACAGGC
AACCCCACCG CGTGTGAACC TGTCACCACA ACGCGCACTG ACCTTGGTAT GGACTATTTA
TGGCCGCTAC TCGCAATCAA CCCGTTTGTG CTGGTTGCAG ACTCCACGCC GCAACATAGT
GAGGACATGG CCAGTGTTGA AACACCTCTT CAAGCCATCC AAGTGGGTGT GCGACTGGCA
CGCGCCAACC CTGTGGACAT GGGTTGGGAC AGTGAATGGT GCAATGAGGA TGGTTCCGTA
GTGAGCCAGG CCGAGTACAA CAAGCGCACC GAAACCACGC AAGAAGACTT GGCCGGCGCC
GTGTGGCCGT ACGGTTTTGT GTTCTACGTG ATCGCTGGTG GTCTAGCGCT CTTCGGCGCA
GAACGCCGCA TCCGTACACC TGTTGCGACG CTCGCCAAGG GGGTGCGCAT CGCATAG
 
Protein sequence
MSTVDLHEPP TAAVEQPRRL TWHGVSTVAR LELIQRLRSS RWKIVLALWF VGVGVICLLI 
TTATTSMTSY SSNATPIGQW IFGMNVFFIL FMGLLVTPSL GSTAINGDRN GGTLAILQAS
LLSSWEIILG KWLAGWTTSL AFLIASLPYI IWSLAAGGVS VWSVIVVVAV MMFILAVVCA
VSVFWSAKMV KTATSTLMSY FSVALVSLIS LLLFGLGLVV IQHDTQVRVM QPSEWSPTTG
NPTACEPVTT TRTDLGMDYL WPLLAINPFV LVADSTPQHS EDMASVETPL QAIQVGVRLA
RANPVDMGWD SEWCNEDGSV VSQAEYNKRT ETTQEDLAGA VWPYGFVFYV IAGGLALFGA
ERRIRTPVAT LAKGVRIA