Gene Jden_0413 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJden_0413 
Symbol 
ID8379599 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJonesia denitrificans DSM 20603 
KingdomBacteria 
Replicon accessionNC_013174 
Strand
Start bp436149 
End bp436841 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content54% 
IMG OID645003144 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_003160381 
Protein GI256831654 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2011] ABC-type metal ion transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.898355 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCAGG TTGTGACGTT CTTTGATGGG CAAACAGACT GGTCTGTGAT GGGCCCTGAA 
TTGTGGGAAC AAGTGGGCAC CACCATGTAC ATGGTGGGGA TTGGGATGCT CATTGGTGGT
TTTGTGGGTT TGCTGATGGG CTTGTTGTTG TACCTGACTC GCCCGGGCAA TCTTTTGCAA
AACGCCGTGG TTTTCACGGT TCTCAATGTC CTTATTAATA TTGTGCGGCC CATTCCGTTC
ATTATTTTTG TCACTGCTAT TGGGCCGTTA ACTCGTGTTG TTGTGGGGAC GACCCTGGGT
CCGACAGCTG GGGCGTTTGC TATTACGTTC ATGGCTGCGT TTGCGTTTGC CAGGTTGGTG
GAGCAGAACC TTGTCGCGCT TGACCCGGGT GTCATTGAGG CGGCTCGTGC GATGGGTGCG
TCGAAGTTCC GGGTGATTTG GTCGGTGGTG ATTCCAGAAG CGTTGGGTCC ACTGATTCTT
GCCTACACGT TCTTGTTCAT CGGTGTGGTG GACATGTCCG CGATGGTGGG GGCTATTGGC
GGGCAAGGGC TCGGCGAGTT CGCGCTGCGT CAGGGGTATG CACGGTTCAA CTGGGAAATT
ACGTTCGTGA CGGTGGTTGT CATCATTATC ATCGTTCAGT TCGCCCAGTT CTTGGGGAAC
TTCCTGGCCC GAAAAGCGAT GCGGCGTGGC TAA
 
Protein sequence
MSQVVTFFDG QTDWSVMGPE LWEQVGTTMY MVGIGMLIGG FVGLLMGLLL YLTRPGNLLQ 
NAVVFTVLNV LINIVRPIPF IIFVTAIGPL TRVVVGTTLG PTAGAFAITF MAAFAFARLV
EQNLVALDPG VIEAARAMGA SKFRVIWSVV IPEALGPLIL AYTFLFIGVV DMSAMVGAIG
GQGLGEFALR QGYARFNWEI TFVTVVVIII IVQFAQFLGN FLARKAMRRG