Gene Jden_0404 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJden_0404 
Symbol 
ID8379592 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJonesia denitrificans DSM 20603 
KingdomBacteria 
Replicon accessionNC_013174 
Strand
Start bp427641 
End bp428147 
Gene Length507 bp 
Protein Length168 aa 
Translation table11 
GC content56% 
IMG OID645003136 
Productprotein of unknown function DUF1706 
Protein accessionYP_003160374 
Protein GI256831647 
COG category[S] Function unknown 
COG ID[COG4283] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.408564 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTCGGC CAACCTCGCG TGCGGAACTT TCTACCCTGA GTAAGCAGCG GATGAATGAT 
CTCAACGCGC TTGTTGACTC GCTGACTGAA GAGCAACTCA CCGCTGAGTT TGCTGGTGTG
GGTCGTGACC GGTGTGTGCG TGATGTGCTG ATCCACCTGC ACGAGTGGCA TCTCATGGTG
TTGGCGTGGG CGAGGGGCAA CATGGCTGGT CAGACGCAAC CCTTTTTGCC TGCGCCATAC
ACGTGGGCCA CCTATGGGAA ATTGAATGTG GAGTTGTGGG AACGTCACCA ACACACCCCG
CTGACCGATG CGCGTACCGC GTTGGCCCGC AGCCACCAGG AGGTGATGGA CCTGATTTCT
CAGTTCACCG ATGAGGAGCT CTTTACCAAG AAATACTTCC CCTGGACTGG CAGTACCTCA
CTAGGGAGTT ATTGTGTGTC GTCCACGTCA AGTCACTACG ACTGGGCGAG GAAGATTATC
CGTGCGCATC AGAGAAGAGC AATATAA
 
Protein sequence
MPRPTSRAEL STLSKQRMND LNALVDSLTE EQLTAEFAGV GRDRCVRDVL IHLHEWHLMV 
LAWARGNMAG QTQPFLPAPY TWATYGKLNV ELWERHQHTP LTDARTALAR SHQEVMDLIS
QFTDEELFTK KYFPWTGSTS LGSYCVSSTS SHYDWARKII RAHQRRAI