| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_0392 |
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| Symbol | |
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| ID | 8379581 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jonesia denitrificans DSM 20603 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013174 |
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| Strand | + |
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| Start bp | 415576 |
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| End bp | 417030 |
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| Gene Length | 1455 bp |
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| Protein Length | 484 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 645003125 |
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| Product | peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin |
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| Protein accession | YP_003160363 |
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| Protein GI | 256831636 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1876] D-alanyl-D-alanine carboxypeptidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.150656 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTACGC TTGATGAGCC GGCATGGGGA GTTCTGCCCG TCCGCCAGGT CATTGGATGT
TCACCGCACC GGCACCGCAC CACGCTGTTC ACTGTCCGTA CCCCAAGGTG CCCTCACGCC
GCAAGGAACG AAGGTAAAAC CCCGCGCATG ACCACGACAC TCCGCCACCG CCCGCACGGG
CGTCACCAAG GGAAGACCAG CTACTTCCCG AACCGTGAAC TCCACAACGC CATCATCGCG
GTGAAATCAA AACTCGCCAC TCAGATCGCC GTGTCCGGGT TTGCCTTCAC AGGAATTGTG
GCAATCGCCA CCGCAACGAC CGCAGTTCCC GTCCCTGATG ACACCATCCT CACTGCGGCA
GGCAACACCA CAGTCGTTCC GGGGGCAGAA GATGCCAGCA ACGAAACACC AGAACAATCT
CCTAGTACCC CAGCTCGCAA CGCGAACGAC ATCGCTGTCA TCCAAGCAGC AGAACTCATC
TCACAGGTAC GCTCCCTCGG AGAAGCAGCA GACCCCGAAC TTCTTGAAGC TGCCGCTGAA
CTCGAACTGT TAGCGGCAGG CCTCCACTCG GGAACAAGCG CTACTCAAGC TGCGCAAGTG
GGCCGCCATG CCGCCGCATC CCGTTCCACC GAACGCGACG CATCGGCGAT CACAGACACA
TCAGACAACG ACACAAACGC CAGCGACTCA GACAGCGACA GCGTGAACAC AGTGTCAGAA
GAAGTTACTA CCGTTGACCT CGGCGACATC CTCAACGCCG ACACAGCCGA GGACACCGCT
AACGCGCCAA CAGAACAGCC CACTGAAGAC ACCTCCCGCG ACGCCGCTAA GTCAACCGAC
GCCGCTAAGT CAACCGACGC CGCCGACGAA CCCGTCAGCG CAGAACAAGT ATCCGCAGCC
GCACTCGAAG TCGAAGAACT CCTCACCCTC GCAACCACCG TCGAGGTCAC CTCAGTCGCG
GAAATCACCG CCGAGAAAGA ACGTATCGCC CAAGCCGAGC GCGACAAAGC CTGGGAAGAA
GCAGTCGTCC TCGCCAATGA CGCCGCAAGC TACGGAAACG GTCGAATCCC ACTGAGCGCC
CTGCGGTCAC TGGACACAGC TCCAGGACAC TACCTGCGCG CAGACGCAGC CATGATGTGG
GAAGAACTGA ACGCCGAGTT CACAAAAGTC TTTGGACACT CCATTGGACT CACCGACTCC
TACCGCTCCT ACAGCGCGCA AGTCGCCACC AAAGCCGCGA AAGGATTCTG GGCGGCCACC
CCCGGCACAT CCAACCACGG ATGGGGTCTA GCCGTGGACA TCAAGGGCGC AGCAGCACAA
TGGGGAACCG CTGAACGCAA CTGGCTTGTG CGCAACGGTG GCCGCTACGG GTGGATCTCA
CCCGACTGGG CACAACCAGG ACAAGGTAAA GAAGAGCCGT GGCACTGGGA ATATGTTCGC
CCCGACGGCT CCTAG
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| Protein sequence | MFTLDEPAWG VLPVRQVIGC SPHRHRTTLF TVRTPRCPHA ARNEGKTPRM TTTLRHRPHG
RHQGKTSYFP NRELHNAIIA VKSKLATQIA VSGFAFTGIV AIATATTAVP VPDDTILTAA
GNTTVVPGAE DASNETPEQS PSTPARNAND IAVIQAAELI SQVRSLGEAA DPELLEAAAE
LELLAAGLHS GTSATQAAQV GRHAAASRST ERDASAITDT SDNDTNASDS DSDSVNTVSE
EVTTVDLGDI LNADTAEDTA NAPTEQPTED TSRDAAKSTD AAKSTDAADE PVSAEQVSAA
ALEVEELLTL ATTVEVTSVA EITAEKERIA QAERDKAWEE AVVLANDAAS YGNGRIPLSA
LRSLDTAPGH YLRADAAMMW EELNAEFTKV FGHSIGLTDS YRSYSAQVAT KAAKGFWAAT
PGTSNHGWGL AVDIKGAAAQ WGTAERNWLV RNGGRYGWIS PDWAQPGQGK EEPWHWEYVR
PDGS
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