| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_0389 |
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| Symbol | |
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| ID | 8379578 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jonesia denitrificans DSM 20603 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013174 |
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| Strand | - |
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| Start bp | 412371 |
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| End bp | 413039 |
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| Gene Length | 669 bp |
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| Protein Length | 222 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 645003122 |
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| Product | transcriptional regulator, TetR family |
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| Protein accession | YP_003160360 |
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| Protein GI | 256831633 |
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| COG category | [K] Transcription |
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| COG ID | [COG1309] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.245239 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGAACCAGA GTGCAATTAC CGATGCGCCT CCCCCAACCA GCGTCAGCCA TCGTGAGTCC
AAGCGGGAGA AGACACGACT GTCACTGATC CGTCACGCCC GGCGCCTCAC CGCCGAGCGC
GGTCTTGGCG GGTTCACCAT TGACGAGTTG TGCACCCAAG TTGGGGTGTC ACGGCGAACG
TTCTTCAACT ATTTCGCGTC CAAAGATGAT GCTGTGATTG GTGCCGCGCT TGGGGAATCT
TGGGCAACTT ATGCCACTGA CTTTTGTAAT ACCAGCACAC ACCCGCGCCT TCTTGACGCA
CTGACCGCGC TGCTCACTCA AACCATGCGC ACCATGCTGC GCGACGAACA CACCCCTCAA
CACATGATGG AGTTGTTTGT TTCAGAGCCT TCCTTGTTTG CCCGCATGAA GGAACTCACC
AACCAACGAC ACCGTGAACT TGCTGCCCTC ATTCGGGAAC GCGAGGGCCT CGACGACGGT
GACGGGTTCG CTGAGGTCAT CGCAGAGACA CTGTCCCACG TTGCGGTGCA CACTTTTTTT
GAGTTCACCC ATCGCAGCTG TGAAACAGGC GTTGCCCTTC ATGAGGCGTC ACCGGACCTC
CATATGGCCG TATTTGAGGA AGCTTTCCGC ACCAAGCTCA CCTATTTATC CCGGCTTTTT
CAGCAGTAG
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| Protein sequence | MNQSAITDAP PPTSVSHRES KREKTRLSLI RHARRLTAER GLGGFTIDEL CTQVGVSRRT
FFNYFASKDD AVIGAALGES WATYATDFCN TSTHPRLLDA LTALLTQTMR TMLRDEHTPQ
HMMELFVSEP SLFARMKELT NQRHRELAAL IREREGLDDG DGFAEVIAET LSHVAVHTFF
EFTHRSCETG VALHEASPDL HMAVFEEAFR TKLTYLSRLF QQ
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