| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_0385 |
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| Symbol | |
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| ID | 8379575 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jonesia denitrificans DSM 20603 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013174 |
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| Strand | - |
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| Start bp | 407135 |
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| End bp | 409333 |
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| Gene Length | 2199 bp |
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| Protein Length | 732 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 645003119 |
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| Product | LPXTG-motif cell wall anchor domain protein |
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| Protein accession | YP_003160357 |
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| Protein GI | 256831630 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3867] Arabinogalactan endo-1,4-beta-galactosidase |
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| TIGRFAM ID | [TIGR01167] LPXTG-motif cell wall anchor domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.677811 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGACGAC ATGTTCTCCG CACAGTCGCA CTCACATCCG CGACGCTTCT AGCCCTTGCA
GCACTCCCCG CATCAGCAGA CGAACCAGGC CCCGTCGAGG CCGGAGTGTT CGTTGACAAA
ATCGAAGGAC TGCCCACCGA CTTTATCCGC GGGGCTGACG TATCCTCCGT TCTCGCCCTC
GAAGAATCAG GCGTCGTTTT CCGTGACTCC GACGGCAACC CGGCTGACCT CTTCACAACA
CTGGCAGACA ACGGACTCAA CACAGTACGC ATCCGCGTCT GGAACGACCC CTTTGACGAG
CAAGGGCGCA GCTACGGCGG CGGAAACAAC GACCTTGACG CCGCCGTCAC CATTGGTCAA
CGCGCCACAG CCGCCGGTAT GGACAGTCTC ATCAACTTCC ACCTCTCCGA CTTTTGGGCA
GACCCCGCCA AACAGCAAGC ACCCAAAGCG TGGGCTGACA TGAGTGTCAG CGAGAAAGCT
GACGCCACCT ACGACTATGT CGCCGATTCT CTGACAGTGC TTCGTGACGC TGGGGTCGAC
ATCAGCATGG TTCAGGTCGG CAATGAAACC AACAACTCTG TTGCTGGGGT TGAGGTTGGC
AACTGGGAAC AGATGGCGGA GATCTTTAAC GCTGGGTCCC GTGCCGTTCG TGACGTCCTC
CCCGACGCCC AGGTCGCCCT GCACTTCACT AACCCAGAAA CTTCCGGGCG CTACGCTGGC
TACGCCCAGC AACTCGCCAC ACACAACGTG GACTATGACG TCTTCGCATC GTCCTGGTAC
CCCTACTGGC ATGGCAGCCT GAGTAACCTC ACCTCCGTGT TGTCGGACAT CGCAACGACC
TACAACAAAG ACGTCATGGT GGTGGAAACG TCCTGGACGT ACACCCTCGA CGACGGGGAC
GGGTGGCAAA ACACCATTGA CGCCTCAAAA GCCTCCACGC TCTACCCGAT CTCACCGCAA
GGGCAAGCTG ACCTCCTCCA CGACGTGATG GAAGCTGTCC ACAACGTCGG AGACGCAGGC
GTTGGCGTGG TGTACTGGGA ACCCGCCTGG CTCCCCGTGG GCCCACCAGA GGAGATCGAC
AACAACCGCA CCCTGTGGGA AGAGTTCGGC TCCGGCTGGG CGTCATCCTA CGCAAGCGGG
TACGACCCAC ACGATGCAGG CCAGTGGTAT GGCGGTTCCG CTGTGGACAA TCAAGCACTC
TTTACCTTTG ACGGGCGTCC CCTCGATTCG TTAGGTGTGT TCTCCCACGT CTACACCGGT
GCTGTCACCG AAAAATCCCT CGCCTCCATT GACCCTGTCG CCGTTGAGGT TACTGCCGGA
GAAACGATCA CGCTCCCAGA CGAGGTGACA CTGCGGTTCA ATGACGGAAG CACTGACACC
GAATCAGTCA CCTGGGACGA CTACTCCACC CTGACTGACG TTGGCGCTCA TGAGGTTGCT
GGGACCACCA GTTCCGGCGT AGCGGTCACC GCAACCATCA CCATTGTGGA AGTCAACGTT
CTCCTCAACC CGTCCTTCGA AGACGCGGAC CTGTCCATGT GGGACATTGA CGGAACCGGA
ATCGCCCGGG AAGAAACATC CGACTCCTCC CACGGCGCGT TCTCACTGAA GTTCTGGAAT
GGCACGAACT ACACCTTCAC CGTGTCACAA ACCCTCACTG GTCTCACCCC AGGGACCTAC
ACGATGCGGG CAACAAGCCA AGGTGGAGAC GCCGGAGAAA ATGACGTCCT CACCGTGTCT
GCCCACACAA CACAGGGCAC AACACGTGGC GACCTTGCCC TCAACGGGTG GCAGCAGTGG
GCCACCGCCA CTGTGGAGAA CGTGACCGTC CCCGACGACG GCACAATCAC CGTCACACTC
ACCGGTGAAC TCACCGGAAA CGCGTGGGGA ACCCTCGACA ACGTGGTCCT CACACCTACC
GGCGCAGCCA CAAGCCCAGA CACCGAGGCA ACCCCAGACG AGGGCACCAC ACCAGACACC
GAAGAAACCC CGGACACCCC TTCACCTGGC ACCGAAACCA CCCCTGGTCA GGACGGCACA
GCCCCAGATA CGACAACCGA TGCGCCCGCC AGTGGGCAAG ACAACTCCAG TACCGGTGGC
CTAGCAGATA CCGGCATCTC ACTGGTCATC GCAGGACTCG CAGGAGCCCT CCTCCTTGCC
GGTGGCATCA CCGTGTGGCT ACGCAAACGC GCCGCCTAA
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| Protein sequence | MRRHVLRTVA LTSATLLALA ALPASADEPG PVEAGVFVDK IEGLPTDFIR GADVSSVLAL
EESGVVFRDS DGNPADLFTT LADNGLNTVR IRVWNDPFDE QGRSYGGGNN DLDAAVTIGQ
RATAAGMDSL INFHLSDFWA DPAKQQAPKA WADMSVSEKA DATYDYVADS LTVLRDAGVD
ISMVQVGNET NNSVAGVEVG NWEQMAEIFN AGSRAVRDVL PDAQVALHFT NPETSGRYAG
YAQQLATHNV DYDVFASSWY PYWHGSLSNL TSVLSDIATT YNKDVMVVET SWTYTLDDGD
GWQNTIDASK ASTLYPISPQ GQADLLHDVM EAVHNVGDAG VGVVYWEPAW LPVGPPEEID
NNRTLWEEFG SGWASSYASG YDPHDAGQWY GGSAVDNQAL FTFDGRPLDS LGVFSHVYTG
AVTEKSLASI DPVAVEVTAG ETITLPDEVT LRFNDGSTDT ESVTWDDYST LTDVGAHEVA
GTTSSGVAVT ATITIVEVNV LLNPSFEDAD LSMWDIDGTG IAREETSDSS HGAFSLKFWN
GTNYTFTVSQ TLTGLTPGTY TMRATSQGGD AGENDVLTVS AHTTQGTTRG DLALNGWQQW
ATATVENVTV PDDGTITVTL TGELTGNAWG TLDNVVLTPT GAATSPDTEA TPDEGTTPDT
EETPDTPSPG TETTPGQDGT APDTTTDAPA SGQDNSSTGG LADTGISLVI AGLAGALLLA
GGITVWLRKR AA
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