Gene Jden_0366 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJden_0366 
Symbol 
ID8379556 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJonesia denitrificans DSM 20603 
KingdomBacteria 
Replicon accessionNC_013174 
Strand
Start bp387942 
End bp388358 
Gene Length417 bp 
Protein Length138 aa 
Translation table11 
GC content59% 
IMG OID645003100 
ProductProtein-tyrosine phosphatase, low molecular weight 
Protein accessionYP_003160338 
Protein GI256831611 
COG category[T] Signal transduction mechanisms 
COG ID[COG0394] Protein-tyrosine-phosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCTC GCCCATCAGT GCTTTTTGTC TGTGTTCACA ATGCTGGCCG CTCCCAGATG 
GCCGCTGGTT TTCTGCGTCA CTTGGGTGGC GACAACGTGG AGGTTCGGTC TGCCGGTTCC
GCACCAGCGA ACCAGATCAA CCCTGTTGCT GTCGATGCGA TGAACGAGGT GGGCATTGAC
ATCACCGCTG AACAACCAAA GGTTCTGACC ACGGACGCTG TTCAGGCGTC CGATGTGGTG
ATTACCATGG GGTGCGGTGA TGCGTGCCCT ATTTTCCCGG GGAAACGCTA CGAGGATTGG
AAGCTAGAGG ACCCAGCGGG CCAGGGCATC GAGTCGGTGC GACCCATCCG TGACGAGATC
CGTCAGCGGA TCCTCACCCT CCTTGGTGAG CTGGGTGTGG AACCTGTGAC GTCCTGA
 
Protein sequence
MTARPSVLFV CVHNAGRSQM AAGFLRHLGG DNVEVRSAGS APANQINPVA VDAMNEVGID 
ITAEQPKVLT TDAVQASDVV ITMGCGDACP IFPGKRYEDW KLEDPAGQGI ESVRPIRDEI
RQRILTLLGE LGVEPVTS