| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_0356 |
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| Symbol | upp |
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| ID | 8379546 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jonesia denitrificans DSM 20603 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013174 |
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| Strand | - |
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| Start bp | 376340 |
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| End bp | 376978 |
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| Gene Length | 639 bp |
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| Protein Length | 212 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 645003089 |
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| Product | uracil phosphoribosyltransferase |
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| Protein accession | YP_003160328 |
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| Protein GI | 256831601 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0035] Uracil phosphoribosyltransferase |
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| TIGRFAM ID | [TIGR01091] uracil phosphoribosyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.925277 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCGCTTGC ACGTAGCTGA TCACCCATTG ATTTCCCATA AGCTTGCTGT TCTTCGGAAT
AAGGAAACAG CGTCGCCGAC GTTTCGGCAG CTTGTTGATG AACTTGTCAC GCTCCTCGCT
TATGAGGCTA CCCGTGATGT GCGGACAACT GAGCATCCGA TTTCGACTCC GGTGACTGAC
ACGGTGGGGG TGAAGATCGC TGATCCTCAG CCGCTTGTGG TCCCGATTTT GCGTGCCGGT
TTGGGCATGT TGGAGGGGAT GACTCGGTTG GTTCCCACTG CTGAGGTGGG TTTTTTGGGG
ATGCAACGCA ATGAGGAGAC TCTTGAGGTT GCGACGTATG CGAACCGGCT TCCTGATGAT
TTGACGGGCC GCCAGTGTTT CTTGTTGGAC CCGATGTTGG CGACGGGCAA CACGTTGGTT
GCGGCTATTG ATTTTCTGTT TGAGCGCGGG GCGAAGGATG TCACTGCGGT GTGTTTGATT
GCTGCACCTG AGGGCATCAA GGTGGTTGAG GAGCATGTGG GCGACCGTCT TGATGTGAAT
GTGGTGGTTG CGGCTGTTGA TGAACGGTTG AATGAGCAGG CGTACATTGT GCCTGGGCTT
GGCGATGCGG GTGACAGGTT GTACGGCATC GTTGATTAA
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| Protein sequence | MRLHVADHPL ISHKLAVLRN KETASPTFRQ LVDELVTLLA YEATRDVRTT EHPISTPVTD
TVGVKIADPQ PLVVPILRAG LGMLEGMTRL VPTAEVGFLG MQRNEETLEV ATYANRLPDD
LTGRQCFLLD PMLATGNTLV AAIDFLFERG AKDVTAVCLI AAPEGIKVVE EHVGDRLDVN
VVVAAVDERL NEQAYIVPGL GDAGDRLYGI VD
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