Gene Jden_0349 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJden_0349 
Symbol 
ID8379539 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJonesia denitrificans DSM 20603 
KingdomBacteria 
Replicon accessionNC_013174 
Strand
Start bp369630 
End bp371489 
Gene Length1860 bp 
Protein Length619 aa 
Translation table11 
GC content57% 
IMG OID645003082 
Productchaperone protein DnaK 
Protein accessionYP_003160321 
Protein GI256831594 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0443] Molecular chaperone 
TIGRFAM ID[TIGR02350] chaperone protein DnaK 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.760609 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCCGTG CAGTAGGAAT TGACCTCGGA ACCACAAACT CCTGCGTTGC TGTCCTTGAA 
GGTGGCGAAC CCACCGTCAT CGCCAACGCA GAAGGTATGC GCACCACCCC ATCGGTTGTT
GCATTCTCCA AAACCGGTGA AGTACTTGTC GGTGAAATCG CCAAGCGTCA AGCAGTCACC
AACGTTGACC GCACCATCTC CTCCGTCAAG CGCCACATGG GCACCGACTG GAGTCAAGAG
ATCGACGACA AACAGTACAC CGCGCAGGAA ATCTCTGCCC GTATCCTTGG CAAGCTCAAG
CGAGACGCTG AAGAATACCT CGGCGAACCT GTCACCGACG CTGTGATCAC CGTTCCTGCG
TACTTCAACG ACGCAGAACG TCAAGCAACC AAAGATGCCG GACAAATCGC AGGCCTCAAC
GTTCTGCGCA TCGTCAACGA GCCCACCGCC GCAGCACTGG CCTACGGTCT GGAAAAGGGC
AAAGAAGACG AACTCATCCT CGTGTTCGAC CTTGGTGGGG GAACCTTCGA CGTCTCGCTG
CTTGAAGTAG GAAAAGACGA AGACGACTTC TCTACCATCC AGGTGCGCGC CACCTCCGGT
GACAACCGCC TCGGTGGAGA CGACTGGGAC AAAGCCATCG TTGACTACCT CATCAAAGAG
GTCAAGAAAA CAGACGGCGT TGACCTGTCC AAAGACAAGA TCGCGCTCCA GCGCCTGCGT
GAAGCTGCAG AACAAGCCAA AAAGGAACTG TCCTCTGCAA CGTCAACCAA CATCTCCATG
CAGTACCTGT CCATGAGCGA GAATGGCCCC ATCCACCTCG ACACCAAGCT CACCCGAGCC
CAGTTCGAGC AGATGACCGA CGACCTCCTC AAGCGGACGG AAGCACCCTT CCGCGCTGTC
ATCCGAGATG CAGGCATCTC CGTCAACGAC ATCGACCACA TCGTGCTTGT TGGTGGCTCC
ACCCGTATGC CAGCCGTAAC CGAGAAGGTC AAAGAACTCA CCGGCGGAAA AGAACCCAAC
AAGGGTGTCA ACCCAGACGA GGTTGTTGCC GTGGGTGCAG CCTTCCAAGC TGGTGTGCTC
AAGGGTGAAC GTAAAGACGT CCTCCTCATT GACGTGACCC CACTGTCCCT CGGGATTGAA
ACCAAGGGTG GCGTCATGAC CAAGCTCATC GAGCGCAACA CGGCGATCCC CACCAAGCGC
AGCGAAATTT TCTCCACCGC AGAAGACAAC CAGCCTTCCG TGCTCATCCA AGTCTTCCAA
GGTGAACGTG AATTCGCCCG CGACAACAAG CCACTGGGCA CCTTTGAACT CACCGGCATC
GCCCCAGCAC CACGCGGAAT GCCACAAGTC GAGGTCACCT TCGACATCGA CGCTAACGGT
ATCGTCCACG TGTCCGCGAA AGACAAGGGC ACCGGCAAGG AACAATCCAT GACCATCACC
GGTGGGTCCT CCCTTCCCAA GGAAGACATC GACCGGATGG TGCGCGAAGC CGAAGAACAC
GCCGCCGAAG ACAAGAAGCG CCGTGAAGAC GCTGAAACCC GCAACCAGGC AGAGTCCTTC
GCCTACTCGG TGGAAAAGCT CCTCAAAGAA AACGACGAGA AGCTCAGCGA CGACGTCAAG
ACCACAGTCT CCAGCGACGT TGACGCCCTG AAGAAGGCGC TCGAAGGCGA CGACATCGAC
GACATCAAGG CAAAGAACGA AGCACTTGTT GCGTCCTCGC AAAAGATCGG CGAAGCCCTG
TACGCACAGG AGCAAGCCGC AGCAGCAGAC GGCGACGCAC CTGCAGACGC AAGCAGCGCA
TCGGCAGACG AGGACGTTGT GGACGCAGAA ATCGTCGACG AGGAGGATGA CAAGAAGTGA
 
Protein sequence
MARAVGIDLG TTNSCVAVLE GGEPTVIANA EGMRTTPSVV AFSKTGEVLV GEIAKRQAVT 
NVDRTISSVK RHMGTDWSQE IDDKQYTAQE ISARILGKLK RDAEEYLGEP VTDAVITVPA
YFNDAERQAT KDAGQIAGLN VLRIVNEPTA AALAYGLEKG KEDELILVFD LGGGTFDVSL
LEVGKDEDDF STIQVRATSG DNRLGGDDWD KAIVDYLIKE VKKTDGVDLS KDKIALQRLR
EAAEQAKKEL SSATSTNISM QYLSMSENGP IHLDTKLTRA QFEQMTDDLL KRTEAPFRAV
IRDAGISVND IDHIVLVGGS TRMPAVTEKV KELTGGKEPN KGVNPDEVVA VGAAFQAGVL
KGERKDVLLI DVTPLSLGIE TKGGVMTKLI ERNTAIPTKR SEIFSTAEDN QPSVLIQVFQ
GEREFARDNK PLGTFELTGI APAPRGMPQV EVTFDIDANG IVHVSAKDKG TGKEQSMTIT
GGSSLPKEDI DRMVREAEEH AAEDKKRRED AETRNQAESF AYSVEKLLKE NDEKLSDDVK
TTVSSDVDAL KKALEGDDID DIKAKNEALV ASSQKIGEAL YAQEQAAAAD GDAPADASSA
SADEDVVDAE IVDEEDDKK