Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jden_0344 |
Symbol | |
ID | 8379536 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jonesia denitrificans DSM 20603 |
Kingdom | Bacteria |
Replicon accession | NC_013174 |
Strand | + |
Start bp | 364334 |
End bp | 364885 |
Gene Length | 552 bp |
Protein Length | 183 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 645003079 |
Product | transcriptional regulator, MarR family |
Protein accession | YP_003160318 |
Protein GI | 256831591 |
COG category | [K] Transcription |
COG ID | [COG1846] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.603295 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.222787 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGGAAC CAACCCCCGC ACCCAACACC CCCTACTGGT ACCCCGACCG CGACCACGTC CACGATGTCC TCGATGGAAT CCGTCGATTT CGCCGCGCCA ACGCGGCCAT GCGCAAACGC ATGGCCGACG GCATGGGAAT GAACAAAACA GACATGCAAG CACTCCAAGC GGTCATTGCA GCGCAGCGAC ACGGAGCCCC CTTGCACCCC CGCGAACTTG CTGACGAACT CGACATCTCC ACCGCATCGA CAACAAAACT GCTGGACCGG CTCGAACGAT CCGGTCATCT CACCAGAGTG CCCCACCCAG CCGACCGCCG CTCGGTGACC ATCCAAGCAA CAGACCATGC TCACACCGAA GTCAAAGACC GACTTGCCCC CATGCACCGC GACATGGAAG AGATCATCTA CGAATTCACC CCCGGAGAAC AACGAGCGAT CGCCATGTTC CTGCACTCCA TGGCTGACCT CTTCGACCGT TCCGGTGACA TCGAACCACT TCGTGATGCG CTGACTGACC AGCTAACCAA CCAAGACGCG GTCCGCAGGT AA
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Protein sequence | MQEPTPAPNT PYWYPDRDHV HDVLDGIRRF RRANAAMRKR MADGMGMNKT DMQALQAVIA AQRHGAPLHP RELADELDIS TASTTKLLDR LERSGHLTRV PHPADRRSVT IQATDHAHTE VKDRLAPMHR DMEEIIYEFT PGEQRAIAMF LHSMADLFDR SGDIEPLRDA LTDQLTNQDA VRR
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