| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_0343 |
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| Symbol | |
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| ID | 8379535 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jonesia denitrificans DSM 20603 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013174 |
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| Strand | - |
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| Start bp | 363594 |
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| End bp | 364190 |
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| Gene Length | 597 bp |
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| Protein Length | 198 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 645003078 |
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| Product | isopentenyl-diphosphate delta-isomerase, type 1 |
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| Protein accession | YP_003160317 |
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| Protein GI | 256831590 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1443] Isopentenyldiphosphate isomerase |
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| TIGRFAM ID | [TIGR02150] isopentenyl-diphosphate delta-isomerase, type 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.447974 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.157249 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGACGACCA CCCCGCACGA CGCGTACCAC CCCCCACATC ACCACAGCAC CAACGCCACC
AACCACGACG TGGTCATCCT GCTTGACGAG GACCACCAGG CCATCGGCAC CGCACCGCGC
GCAACCGTGC ACACCCCCAC CACACCACGC CACCTCGCGT TTTCCTGCTA CCTCCTCAAC
GATGACGGTG AACTCCTCGT CACTCGCAGA GCTTTAAGTA AGAAAACCTG GCCCGGAGTG
TGGACAAACT CGTTTTGCGG CCACCCACGA CCGGGTGAAT CTTTCCACGA CGCCCTCACC
CGCTACGCAC AACTCGAACT AGGCATCACA GACATCCACT CCATCAGTGT TGCCCTACCC
GACTTTGAGT ACACCGCCAC AGACGCCAGC GGCATTATCG AAAACGAGTA CTGCCCCGTC
TTTTACGCTC GCACCTCCCA ACAACCCACC CCCAACCCCG ACGAAGTTGC CGAATACGCG
TGGACGCCGT TCCCCACCTA TGTCCATGCC GCATCGATCA CCCCATTTCT CCTGAGCCCC
TGGTCAGTTG CCCAAACCGC CCAACTTCAC AATCGCGGAG GCACCCATGT CCGTTGA
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| Protein sequence | MTTTPHDAYH PPHHHSTNAT NHDVVILLDE DHQAIGTAPR ATVHTPTTPR HLAFSCYLLN
DDGELLVTRR ALSKKTWPGV WTNSFCGHPR PGESFHDALT RYAQLELGIT DIHSISVALP
DFEYTATDAS GIIENEYCPV FYARTSQQPT PNPDEVAEYA WTPFPTYVHA ASITPFLLSP
WSVAQTAQLH NRGGTHVR
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