| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_0329 |
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| Symbol | |
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| ID | 8379521 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jonesia denitrificans DSM 20603 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013174 |
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| Strand | + |
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| Start bp | 350232 |
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| End bp | 351569 |
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| Gene Length | 1338 bp |
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| Protein Length | 445 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 645003064 |
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| Product | Pectate lyase |
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| Protein accession | YP_003160303 |
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| Protein GI | 256831576 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.0745769 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACACACC AGGCACAAGG AGGCCGGCGT TTCGCCCGCA CCCTGAAAGC CGCATGGAGC
GCAGCGCTCG CTGTTGCGCT CACCGGGGCT GTTGGGTTGG CTGTTGCCAC CCCAGCCCAG
GCAGCATCGG TTGACACCAA CAAGTGGTAT GTACTGGAAA ACCACCAAAG TGGGAAAGCT
CTCGAGGTCG CGAACTTCTC CACCGCAGCT GGCGGTGAAC TCCAGCAGTA CACCCGCAAC
GACGGCGCCT GGCAACAATG GCGTTTCATC TCCGTTGGTA GCGGCTACTA CGTGATCGAA
AACCGGCACT CCGGCAAGGT CATCGACCTG TGGGAGAACA AAACCGCAGA CGGCACCCCA
TTCAAGCAGT GGGACCGCAA CGACCGGTAC AACCAGCAGT TCAAGCTCGT GGACTCCAAC
AACGGTGAAC ACGTTCGCCT CATCAACCGT GCGAACAACG GTGCCGTGAC CGTCACTGAC
CGGTCCAAAG CGGACTTCGC ATCAATCACT GTGTTGTCCA ACAAGAACCA GTACAACCAA
CAGTGGAAAC TCATCCCAGT GTCCACCTCA GGGAACACCG GCGGTAGCAA CTCTGGTGAC
ACCGGCAACA CTGGTGGAAA CAACTCTGGT GACACCGGTA AGGCTGACGG TCAATTCGCT
GCGTGGCCTA AGGCTGCATC AAGCAAGAAG GTGTCCTCCA CCATCAAGGT TCCCAAGTCA
GGTCTTGACG GGAAAATGGT CCGCTACTAC GGCATCTCCG ACGGTAGCCA AGACGAATCT
CAACCCGCCA TGTTTGAACT CGAAGATGGT GCCACGATCA AGAACGTCAT CATCGGTGAA
GGCGCTGGTG ACGGCATCCA CTGCAAGGGA ACCTGCACCA TCGAAAACGT GTGGTGGGAA
AACGTTGGTG AAGACGCCGC TACACAAAAG GGCAAAATCT CTGGTCAAGT CATGACCATC
AACGGTGGTG GGGCGCGCTC TGCTGACGAC AAAGTCTTCC AGCACAACGG CCCAGGCAAA
ATGGTCATCA AGAACGTCCA AATCGAAGAC TTCGGTAAAG TCTTCCGCTC CTGCGGTAAC
TGCTCAACCC AGTACGCGCG GTCCGTGGAG ATTGACAACA TCATGGTGAC CGCACCAGGC
AAGTCACTGG TGGGTATCAA CTCCAACCTT GGTGACAAAG CCACCATCCG CAACGTCACC
ATCGTGGGCG ACTCCAAGCG CAAGATCGCG ATCTGTGAAG AGTACAAAGG TGTGACCAAG
GGTGAACCGA AGAAGGTCGC CTCCGGTCCA TCGAGTGCCT GCAACTACTC GGACAAGGAC
ATCACCTACC GCGACTAA
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| Protein sequence | MTHQAQGGRR FARTLKAAWS AALAVALTGA VGLAVATPAQ AASVDTNKWY VLENHQSGKA
LEVANFSTAA GGELQQYTRN DGAWQQWRFI SVGSGYYVIE NRHSGKVIDL WENKTADGTP
FKQWDRNDRY NQQFKLVDSN NGEHVRLINR ANNGAVTVTD RSKADFASIT VLSNKNQYNQ
QWKLIPVSTS GNTGGSNSGD TGNTGGNNSG DTGKADGQFA AWPKAASSKK VSSTIKVPKS
GLDGKMVRYY GISDGSQDES QPAMFELEDG ATIKNVIIGE GAGDGIHCKG TCTIENVWWE
NVGEDAATQK GKISGQVMTI NGGGARSADD KVFQHNGPGK MVIKNVQIED FGKVFRSCGN
CSTQYARSVE IDNIMVTAPG KSLVGINSNL GDKATIRNVT IVGDSKRKIA ICEEYKGVTK
GEPKKVASGP SSACNYSDKD ITYRD
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