Gene Jden_0311 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJden_0311 
Symbol 
ID8379504 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJonesia denitrificans DSM 20603 
KingdomBacteria 
Replicon accessionNC_013174 
Strand
Start bp331079 
End bp333214 
Gene Length2136 bp 
Protein Length711 aa 
Translation table11 
GC content61% 
IMG OID645003047 
ProductBeta-galactosidase 
Protein accessionYP_003160286 
Protein GI256831559 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1874] Beta-galactosidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0181132 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.0282735 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTTTCG ATCCCCAGTT CCAGCCCCGT GACTACGGCC TTCGTGGTCT GGAAGCGGTC 
ACCTATGGTG GCGACTATAA CCCGGAGCAG TGGCCCCGGC ACGTGTGGCG TGAGGATGTG
CGCCTCATGC GGGAAGCCGG CGTCAACTTG GTGTCCATTG GGATTTGGTC GTGGGCATTG
CTCGAACCAG AGCCAGGTCG GTTCGATTTT GAGTGGCTCG ATGAACTGAT TGAGCTGCTA
TGGGCCAATG AGATCCACGT GGACCTGGCC ACACCGACCG CCGCACCCCC AGCATGGTTT
TACGCCAACA ACCCTGATGC ACGGGTCGTG ACCAGGGACG GTACTGTGCT GACCAACGCG
TCACGCGGGA TGGCCTCACC CTCAGCGCCC GCTTACCGGC AGGCGTGCGC GTCAATAACT
GAAGCGTTAG CGAAACGGTA CGGGGACCAC CCGGCGGTCG CCTTATGGCA CGTACACAAC
GAGTACGGCG CGCCTGTGTC CGACTCGTAC GACGAGTATT CGGTGGCGGC GTGGCGGGTG
TGGCTTCAAC GCCGCTACAC CACGTTGGAC GCGGTCAACG AGGCATGGGG CACCACGTTT
TGGGGGCAAA CCTACACACA GTGGGAGCAC ATCCCTGCCC CTGCTGTGTC CGCAACGGTG
ACAAACCCGT CCATGCGCCT GGACTACCAG CGGTTCACTT CCGATGCGCT GCTGGAATGC
TTCATTGCTG AGCGCGATAT TATCCGCCAG TACTCCACCG CCCCAGTGAC CACGAACTTC
ATGGCATCCT CATGCCCAGC AATGGATCTG TGGGCGTGGG CGCAAGAATG CGACGTCATC
TCCAATGACC ACTACTTAAC AGCTAGTGAC CCCAACAACC ACATCACCTT GGCCATGGAC
GCAGACCTCA CCCGCTCATT GGCGCGCGGA CTGCCATGGA TACTTATGGA ACATTCCACC
TCGGCGGTGA ACTGGCAGGA ACGCAACGTC GCCAAAGCCC CAGGAGAGAT GACCCGCAAC
GCACTGTCCC ACCTGGGGCG CGGCGCAAAC GGCATCATGT TCTTCCAGTG GCGGGCAGCC
CGCTTTGGGG CGGAAAAGTT CCACTCAGCG ATGATCCCGC ACGGCGGCAC CAACACTCGA
GTGTTCCGTG AGGTGTGCTC CCTTGGAGCC ACCCTTGGAG ATCTCACCAG CCAGGGGATC
ACCGCATCGA CAACCCGCGC GCAGGTAGCG ATCCTGTGGG ACTGGGAATC CATGTGGGCC
CAAGACCTCG AATGGCGCCC TTCGGTGGAC GTCGACCACC GCGAACGTAC GGTGGCGTTT
TACCAACAGC TATTCCACGA CCGGTTCACG GTTGATTTTG TGCACCCGGA AGCGGCATTG
GACCAATACG CGTTGGTGAT TGCCCCAGCG TCGTACCTGT TAACGGATGC GGCAGCAGCG
AACATTGATG CGTATGTGCG GGGCGGGGGC AGGTTTGTTG CCTCGTTCTT CACCGGTGTT
GTTGACGACA ATGACACGGT GCGTCATGGC GGGTTGGCAG CGGCGTTGGC CCCGGTTCTT
GGGGTGACGG TGGAGGAATT CCTCCCGTTG CGGGCAGGGG AAACGCTGAC AGTGCACGGC
GACCAGTTGG CGCCGGGGCT GACATTGACT GGCGATGTGT GGGCTGACGA CCTTGTGTTA
GACGGTGCCA AAGATGTGGC GTCCTACGTG GATGGTCCCG CCCCTGGCGG ACCAGCGATC
ACCCGCCATG AATATGGGCA AGGGGTCGCC TGGTATGTGT CAACTCGGCT GTGTGGGGAC
AGCTTACGTG CCGTGTTGGA TGCCGTGTAC AAGGATGCAG GGTTAACCCC AGAGCGTGAC
GTGCCGCACG GCCTTGAGAT CGTTGTGCGC ACCAGCGACA CCGGTGCCAC ATTTGTGACA
GCAATGAACC ACACGGACAC AGACGCAGGG TTCCCACCTG TTGGAGGGCA CGGAACACTG
CAGGGGGTGG ACCTGCGTGG GGGGCGCATC GTCACTCCGC CAGTTGTTGC CCGCACTCAC
ACCACCCCCA CACCAACCGA CGCACCCGTT GCGGTGAGCA CAGTGAGTGA CACCATCATG
GTGCCAGCTC GAGGCAGCGT CGTGGTGGTG AAGTAG
 
Protein sequence
MRFDPQFQPR DYGLRGLEAV TYGGDYNPEQ WPRHVWREDV RLMREAGVNL VSIGIWSWAL 
LEPEPGRFDF EWLDELIELL WANEIHVDLA TPTAAPPAWF YANNPDARVV TRDGTVLTNA
SRGMASPSAP AYRQACASIT EALAKRYGDH PAVALWHVHN EYGAPVSDSY DEYSVAAWRV
WLQRRYTTLD AVNEAWGTTF WGQTYTQWEH IPAPAVSATV TNPSMRLDYQ RFTSDALLEC
FIAERDIIRQ YSTAPVTTNF MASSCPAMDL WAWAQECDVI SNDHYLTASD PNNHITLAMD
ADLTRSLARG LPWILMEHST SAVNWQERNV AKAPGEMTRN ALSHLGRGAN GIMFFQWRAA
RFGAEKFHSA MIPHGGTNTR VFREVCSLGA TLGDLTSQGI TASTTRAQVA ILWDWESMWA
QDLEWRPSVD VDHRERTVAF YQQLFHDRFT VDFVHPEAAL DQYALVIAPA SYLLTDAAAA
NIDAYVRGGG RFVASFFTGV VDDNDTVRHG GLAAALAPVL GVTVEEFLPL RAGETLTVHG
DQLAPGLTLT GDVWADDLVL DGAKDVASYV DGPAPGGPAI TRHEYGQGVA WYVSTRLCGD
SLRAVLDAVY KDAGLTPERD VPHGLEIVVR TSDTGATFVT AMNHTDTDAG FPPVGGHGTL
QGVDLRGGRI VTPPVVARTH TTPTPTDAPV AVSTVSDTIM VPARGSVVVV K