Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jden_0311 |
Symbol | |
ID | 8379504 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jonesia denitrificans DSM 20603 |
Kingdom | Bacteria |
Replicon accession | NC_013174 |
Strand | + |
Start bp | 331079 |
End bp | 333214 |
Gene Length | 2136 bp |
Protein Length | 711 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 645003047 |
Product | Beta-galactosidase |
Protein accession | YP_003160286 |
Protein GI | 256831559 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1874] Beta-galactosidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0181132 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.0282735 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTTTCG ATCCCCAGTT CCAGCCCCGT GACTACGGCC TTCGTGGTCT GGAAGCGGTC ACCTATGGTG GCGACTATAA CCCGGAGCAG TGGCCCCGGC ACGTGTGGCG TGAGGATGTG CGCCTCATGC GGGAAGCCGG CGTCAACTTG GTGTCCATTG GGATTTGGTC GTGGGCATTG CTCGAACCAG AGCCAGGTCG GTTCGATTTT GAGTGGCTCG ATGAACTGAT TGAGCTGCTA TGGGCCAATG AGATCCACGT GGACCTGGCC ACACCGACCG CCGCACCCCC AGCATGGTTT TACGCCAACA ACCCTGATGC ACGGGTCGTG ACCAGGGACG GTACTGTGCT GACCAACGCG TCACGCGGGA TGGCCTCACC CTCAGCGCCC GCTTACCGGC AGGCGTGCGC GTCAATAACT GAAGCGTTAG CGAAACGGTA CGGGGACCAC CCGGCGGTCG CCTTATGGCA CGTACACAAC GAGTACGGCG CGCCTGTGTC CGACTCGTAC GACGAGTATT CGGTGGCGGC GTGGCGGGTG TGGCTTCAAC GCCGCTACAC CACGTTGGAC GCGGTCAACG AGGCATGGGG CACCACGTTT TGGGGGCAAA CCTACACACA GTGGGAGCAC ATCCCTGCCC CTGCTGTGTC CGCAACGGTG ACAAACCCGT CCATGCGCCT GGACTACCAG CGGTTCACTT CCGATGCGCT GCTGGAATGC TTCATTGCTG AGCGCGATAT TATCCGCCAG TACTCCACCG CCCCAGTGAC CACGAACTTC ATGGCATCCT CATGCCCAGC AATGGATCTG TGGGCGTGGG CGCAAGAATG CGACGTCATC TCCAATGACC ACTACTTAAC AGCTAGTGAC CCCAACAACC ACATCACCTT GGCCATGGAC GCAGACCTCA CCCGCTCATT GGCGCGCGGA CTGCCATGGA TACTTATGGA ACATTCCACC TCGGCGGTGA ACTGGCAGGA ACGCAACGTC GCCAAAGCCC CAGGAGAGAT GACCCGCAAC GCACTGTCCC ACCTGGGGCG CGGCGCAAAC GGCATCATGT TCTTCCAGTG GCGGGCAGCC CGCTTTGGGG CGGAAAAGTT CCACTCAGCG ATGATCCCGC ACGGCGGCAC CAACACTCGA GTGTTCCGTG AGGTGTGCTC CCTTGGAGCC ACCCTTGGAG ATCTCACCAG CCAGGGGATC ACCGCATCGA CAACCCGCGC GCAGGTAGCG ATCCTGTGGG ACTGGGAATC CATGTGGGCC CAAGACCTCG AATGGCGCCC TTCGGTGGAC GTCGACCACC GCGAACGTAC GGTGGCGTTT TACCAACAGC TATTCCACGA CCGGTTCACG GTTGATTTTG TGCACCCGGA AGCGGCATTG GACCAATACG CGTTGGTGAT TGCCCCAGCG TCGTACCTGT TAACGGATGC GGCAGCAGCG AACATTGATG CGTATGTGCG GGGCGGGGGC AGGTTTGTTG CCTCGTTCTT CACCGGTGTT GTTGACGACA ATGACACGGT GCGTCATGGC GGGTTGGCAG CGGCGTTGGC CCCGGTTCTT GGGGTGACGG TGGAGGAATT CCTCCCGTTG CGGGCAGGGG AAACGCTGAC AGTGCACGGC GACCAGTTGG CGCCGGGGCT GACATTGACT GGCGATGTGT GGGCTGACGA CCTTGTGTTA GACGGTGCCA AAGATGTGGC GTCCTACGTG GATGGTCCCG CCCCTGGCGG ACCAGCGATC ACCCGCCATG AATATGGGCA AGGGGTCGCC TGGTATGTGT CAACTCGGCT GTGTGGGGAC AGCTTACGTG CCGTGTTGGA TGCCGTGTAC AAGGATGCAG GGTTAACCCC AGAGCGTGAC GTGCCGCACG GCCTTGAGAT CGTTGTGCGC ACCAGCGACA CCGGTGCCAC ATTTGTGACA GCAATGAACC ACACGGACAC AGACGCAGGG TTCCCACCTG TTGGAGGGCA CGGAACACTG CAGGGGGTGG ACCTGCGTGG GGGGCGCATC GTCACTCCGC CAGTTGTTGC CCGCACTCAC ACCACCCCCA CACCAACCGA CGCACCCGTT GCGGTGAGCA CAGTGAGTGA CACCATCATG GTGCCAGCTC GAGGCAGCGT CGTGGTGGTG AAGTAG
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Protein sequence | MRFDPQFQPR DYGLRGLEAV TYGGDYNPEQ WPRHVWREDV RLMREAGVNL VSIGIWSWAL LEPEPGRFDF EWLDELIELL WANEIHVDLA TPTAAPPAWF YANNPDARVV TRDGTVLTNA SRGMASPSAP AYRQACASIT EALAKRYGDH PAVALWHVHN EYGAPVSDSY DEYSVAAWRV WLQRRYTTLD AVNEAWGTTF WGQTYTQWEH IPAPAVSATV TNPSMRLDYQ RFTSDALLEC FIAERDIIRQ YSTAPVTTNF MASSCPAMDL WAWAQECDVI SNDHYLTASD PNNHITLAMD ADLTRSLARG LPWILMEHST SAVNWQERNV AKAPGEMTRN ALSHLGRGAN GIMFFQWRAA RFGAEKFHSA MIPHGGTNTR VFREVCSLGA TLGDLTSQGI TASTTRAQVA ILWDWESMWA QDLEWRPSVD VDHRERTVAF YQQLFHDRFT VDFVHPEAAL DQYALVIAPA SYLLTDAAAA NIDAYVRGGG RFVASFFTGV VDDNDTVRHG GLAAALAPVL GVTVEEFLPL RAGETLTVHG DQLAPGLTLT GDVWADDLVL DGAKDVASYV DGPAPGGPAI TRHEYGQGVA WYVSTRLCGD SLRAVLDAVY KDAGLTPERD VPHGLEIVVR TSDTGATFVT AMNHTDTDAG FPPVGGHGTL QGVDLRGGRI VTPPVVARTH TTPTPTDAPV AVSTVSDTIM VPARGSVVVV K
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