| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_0296 |
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| Symbol | |
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| ID | 8381726 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jonesia denitrificans DSM 20603 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013174 |
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| Strand | - |
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| Start bp | 316986 |
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| End bp | 318524 |
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| Gene Length | 1539 bp |
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| Protein Length | 512 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 645003032 |
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| Product | RNA polymerase, sigma-24 subunit, ECF subfamily |
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| Protein accession | YP_003160271 |
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| Protein GI | 256831544 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.166156 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.0803508 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACCACAT CCGACGCACT CCTCCTCCGC CGCGCTGCCC GCGGCCATGC CGGTGCTTTC
GAAACCCTGT GGTCACGCCA CGCAGACGCC GTCCGCAACA CGGCACACGC CATCGACGCA
AGCTGTGACC CCGAAGACGT CACCCAAGAA TGCTTCACCC AACTTTTCGC CGCACTCAAA
AACGGCGACC ACATTGACGG TCCCCTCCGC CCCTACCTGT ACGTCCTCAC CCGCCACATC
ATCACTGCAT GGCAAGACCC CACAGCCCCC ACACTTACCC CGCACCTGCC CGACATCTGG
GAAGACACCC CCGACACCAT CCACCACAGC GAACACGTCA CCACCGCTTT TCGCGCCCTG
CCACCCGAAT GGCGTTCTGT CCTGTGGTAC ACCGAAGTTG AAGGGATGCA ACCCTCCGAC
CTCGCCCCCA TCCTTGGCAT CTCCGCCAAC GCTGTCGCCG CACTCGCCTA CCGCGCCCGC
GAAGGACTGC GCAACGCCTG GCTTCAAGCA CACGTCACCG CCCACCCCAG CGACAACGAA
TGCGCCTGGG TGACCGAACG TCTCGCCCAA CACGCCCGCG GCACACTCAG CCCCCGTCAA
ACCCAGCGCA TGCAACGCCA CCTTCACCAC TGCGGCACCT GCCCCCGCGC CCTCGCTGAC
GTGCAATCAG TGGCTGCGCG ACTCCGCAGT TCACTGGCCC CACTGTTCCT CGTACCCGTT
GGTGTAGGGG CACTATCCAC AACAACCGAT GCGGCCCTCA CCTCCCCCCT CCACGCAGCA
TGGTCCGCAA CCACCGTCAA GATCGCTGCC ATCGCTCCCG TCAAGTTCGT TGGGGCACTC
GCCGTCACCG GACTCATCGG AGTGGGGTTG TCATCTGGTC TTCTCCTCGC CCAGGCTTGG
GCACAGCCCG CCGACAACGG ACCCGCGCCC TTAGCTGGCA TCGACAGTAC CCGCCCAGAC
TTCGGCGCCC AGCAATACTC GGCAACCTCT CAGTACCAGC AAACCGGGAG CGAACCAGAC
GAGGCGGCAG GACTGTTTGG TGCATCGGCA AACTCCACAC AGCAACCCAA CGACACTGAA
CACGCAGACA CGACCACTGT CAACGACCCC GCAACCACTA CAGCCGACAC AGCAACAGAC
AACAACACAG CGCGTCAAGA AACGCCACGC ACCCCCGCCA CACAATCCAC ACCCACACAA
CAACAAAGCG AACCCGACGC CTCCTCCAAC GAGGCGGCGT CCCACACCGA ACAGCCCGAA
GAAACACCCT CACTCCAACA AACCCACGCA TCCAAAAACC CCATTTTCTT TTCTGGCCGC
GCCCCCTGGT GGGCTCACAT CACCGTCTTG GATGACACTG GAACCGAAGT GGGACGAATC
AAAGCTGGAG CAGACGGCAA CTGGGGGCTG TCAATTAGTG ATACGTACAG CGACAGCGGG
CGCACACACA TGACGTACCG CATATACGCA TCGAAAGACG ACTACTCCAC CGCTGGAGAA
CCTTTCGCGG TCACCACCGT CACTGTCCCC ACCGAGTAA
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| Protein sequence | MTTSDALLLR RAARGHAGAF ETLWSRHADA VRNTAHAIDA SCDPEDVTQE CFTQLFAALK
NGDHIDGPLR PYLYVLTRHI ITAWQDPTAP TLTPHLPDIW EDTPDTIHHS EHVTTAFRAL
PPEWRSVLWY TEVEGMQPSD LAPILGISAN AVAALAYRAR EGLRNAWLQA HVTAHPSDNE
CAWVTERLAQ HARGTLSPRQ TQRMQRHLHH CGTCPRALAD VQSVAARLRS SLAPLFLVPV
GVGALSTTTD AALTSPLHAA WSATTVKIAA IAPVKFVGAL AVTGLIGVGL SSGLLLAQAW
AQPADNGPAP LAGIDSTRPD FGAQQYSATS QYQQTGSEPD EAAGLFGASA NSTQQPNDTE
HADTTTVNDP ATTTADTATD NNTARQETPR TPATQSTPTQ QQSEPDASSN EAASHTEQPE
ETPSLQQTHA SKNPIFFSGR APWWAHITVL DDTGTEVGRI KAGADGNWGL SISDTYSDSG
RTHMTYRIYA SKDDYSTAGE PFAVTTVTVP TE
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