Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jden_0292 |
Symbol | |
ID | 8379486 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jonesia denitrificans DSM 20603 |
Kingdom | Bacteria |
Replicon accession | NC_013174 |
Strand | - |
Start bp | 313832 |
End bp | 315373 |
Gene Length | 1542 bp |
Protein Length | 513 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 645003028 |
Product | BCCT transporter |
Protein accession | YP_003160268 |
Protein GI | 256831541 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1292] Choline-glycine betaine transporter |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.0419043 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTAACGG TAGAACAATG GCGAAATAGC AAGGTCGCAA AGCTAGCGAC AATCCCCCGC ATACCAGCCC GGGAAAAGAC CGGGGTGTCA TTCCCCACAA ACTGGTCCGT CTTTGTGATT GCGATCGCAG CCACCGCCTC AGTTCTCATC TGGGCAAACA TCGCCCCAGA CACAATCTCC ACCACCGGTG GAGCAATCGC CTACAGCTCC TACCGCCGTG GCCGCGCCCC ATTAATTTCC GCCCTGTTTG AACCCGTGTT CCCCAACGCA TCCAACCGGT TCGCCGGGCG CCTCATTGAC GTGTTCGCGA TCATTGTGAC CCTCTTTGGA ACCGCGATCT CCCTCGGCAT TGGAGCGCTC CAAATCCAAT CCGGATTCAC ACTCGTGTCC GGTTTCAGCC CCGAAGGCAA CATGTTCCTC ATCGGGGCGC TCGCTGTTCT CACCTCACTG TTCATCGCAT CGGCAGTGTC CGGTGTGAAA AAAGGTATCC GCGCACTGTC CAACATCAAT ATGGGGCTGA CCATCGCGCT GGCACTGTTC ATGCTCATCG CCGGGCCAAC GGTGTTCCTG CTCAACCTCG TTCCCGCATC AGTGTTCTCG TTCTTCACCG AACTCGGTCT CATGCTGACC CGTAACCCCA ACCAAGGACA AGAAGCACAC GACTTCCTTT CCGCATGGAC CACGTTCTAC TGGGCGTGGT GGGTGTCGTG GACCCCATTC GTGAGGATGT TCATTGCAAA AATTTCCCGC GGGCGTACCT TGCGTCAATA CGTGACGACA GTCGTGCTCG TCCCTGCTGC GATTTCCATG GTGTGGTTTG CCATTTACGG TGGGACAGCA ATCTCCATGA CACTTGACGG CAACGAACTC ATGACCGGTG GTTCCGGTGA GGAAGTGCTG TTCAACATGT TGAGTAACCT GCCCTTTGGG TTGCTCACCT CAATCATCGC CATGATCGCG ATCATCATTT TCTTCATCAC TGCAGCGGAT TCCGCGTCCA TTGTGATGGC ATCGATGTCG CAATCGGGCC GCCCCAACCC GTCAAAACCG GTGACCATCA CGTGGGGTTT GCTTCTCGGG CTTATCGCCA CCTCGTTACT GCTTGCGGGG GGAAATAACG CACTGTCCGG GCTGCAATCC ATCATGGTGG TCACCGCGCT ACCGTTCGCA TTCGTCACGA TCGGTGTGAT GATTACGTGG GCCAAAGATC TGCGCACCGA CCCGTTCATT ATTCGACGCA CCTACGCCCA AGAAGCCATC GCACAAGGTG TGCGGCGTGG GATCGACGAG CATGGTGACG CGTTCGTGTT CTCCGTCAAC GAGGTTCCTG AGGCCGAAGG GGCCGGAGCG AACTTCCCCT CAGATGACCC GGCCCTCACC GAGTGGTACG TGGAAGCAAC CGCGGACGCA GACCCCGACT CCTCCGTTCT CACCGAGTCA GGGCCTCATG TGCCGGTGTC CCCCAGTACC GCACCGGGGA ACACTGCCCC CAGTGCTGCT ACTGCCGATG CGTCCAGCCC AGCTAGGCGG GCACCACGCT GA
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Protein sequence | MVTVEQWRNS KVAKLATIPR IPAREKTGVS FPTNWSVFVI AIAATASVLI WANIAPDTIS TTGGAIAYSS YRRGRAPLIS ALFEPVFPNA SNRFAGRLID VFAIIVTLFG TAISLGIGAL QIQSGFTLVS GFSPEGNMFL IGALAVLTSL FIASAVSGVK KGIRALSNIN MGLTIALALF MLIAGPTVFL LNLVPASVFS FFTELGLMLT RNPNQGQEAH DFLSAWTTFY WAWWVSWTPF VRMFIAKISR GRTLRQYVTT VVLVPAAISM VWFAIYGGTA ISMTLDGNEL MTGGSGEEVL FNMLSNLPFG LLTSIIAMIA IIIFFITAAD SASIVMASMS QSGRPNPSKP VTITWGLLLG LIATSLLLAG GNNALSGLQS IMVVTALPFA FVTIGVMITW AKDLRTDPFI IRRTYAQEAI AQGVRRGIDE HGDAFVFSVN EVPEAEGAGA NFPSDDPALT EWYVEATADA DPDSSVLTES GPHVPVSPST APGNTAPSAA TADASSPARR APR
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