| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_0283 |
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| Symbol | |
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| ID | 8379477 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jonesia denitrificans DSM 20603 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013174 |
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| Strand | + |
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| Start bp | 306012 |
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| End bp | 306740 |
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| Gene Length | 729 bp |
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| Protein Length | 242 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 645003017 |
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| Product | sortase family protein |
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| Protein accession | YP_003160259 |
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| Protein GI | 256831532 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3764] Sortase (surface protein transpeptidase) |
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| TIGRFAM ID | [TIGR01076] LPXTG-site transpeptidase (sortase) family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.741902 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.0594154 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGGCACGGT TCATACTCGG GTTCATCGGA GTCCTCGGTG AACTCATGAT CACAGTAGGT
CTCCTCCTGG GCGGATACGT CCTATGGAAC GTGTGGTGGG ACTCCAACCA ATCCGCCGCA
GTCGCCCAAC AAGGCGTCGA CGACTTCTAC GAAAACCTCG ACGAAGCCCC CCGCGTCCCC
GGCGAACTCA ACACCGAAGA CCCACCCCCC ATCGACCCGC CCCCCGCCGA CGGCGACACC
ATCGGTGTCC TCATCGTCCC CGCATGGTAC GACCTCACCA ACAACACCAT GCCCATCAAA
CAAGGCACCT CAAACGCCGT CCTCGACAAC GCCGCAGCAG GCCACTACGA CGGCACAGCA
ATGCCAGGGA ACCTTGGCAA CTTCGCGCTC GCAGGACATC GGCGCACCCA CGGGAACTCA
TTCCGTTTCG TGGACCGCCT CGAACCGGGT GACCACATTG TGGTGGAAAC AGAAACCACC
TGGTACGTCT ACTCTGTCAC CCAGGATTAC GTGGTCACCC CAGACCAAGT CGATGTGATT
GCCCCGGTAC CCAACGACCC CGGTGCCCGT CCAGAAGAAC GGATCCTCAC CTTCACCACC
TGCCACTCAC CGAGCCTCGG CGAGTGGGGT AACAGCCACC GGTGGATCAC CCACGCCACC
TTTGTTGGGT GGATGCCCCG GTCTGAAGGT ATGCCCGAAC AAGTCCTCAA CGACCCAGGG
GTTCAATAA
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| Protein sequence | MARFILGFIG VLGELMITVG LLLGGYVLWN VWWDSNQSAA VAQQGVDDFY ENLDEAPRVP
GELNTEDPPP IDPPPADGDT IGVLIVPAWY DLTNNTMPIK QGTSNAVLDN AAAGHYDGTA
MPGNLGNFAL AGHRRTHGNS FRFVDRLEPG DHIVVETETT WYVYSVTQDY VVTPDQVDVI
APVPNDPGAR PEERILTFTT CHSPSLGEWG NSHRWITHAT FVGWMPRSEG MPEQVLNDPG
VQ
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