Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jden_0282 |
Symbol | |
ID | 8379476 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jonesia denitrificans DSM 20603 |
Kingdom | Bacteria |
Replicon accession | NC_013174 |
Strand | - |
Start bp | 303545 |
End bp | 305848 |
Gene Length | 2304 bp |
Protein Length | 767 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 645003016 |
Product | hypothetical protein |
Protein accession | YP_003160258 |
Protein GI | 256831531 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.14346 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCCCGCC CGGTTGAGAT GCGTCGATTG TTTGTGTCGG TGCTTGTTGC GTGTGTTGTG TCCACAGTGG GGGTGGCGGT TCCTGCGGGT GCTGCTGGTG GTGCGCATCG GGAGTCTGAT TCGGCGACGA CGACGGTGAC GGTTGCGGGC ACGTTGCGGG CGATGGTGGT CCATGATGAG GACCGTGGTG AGGTGTCCAC GCATGTGTTG GGTGAGGGTG CCCGCACGGG TGTGGATTAT GCGGTTGAGG TTGATGGCGC GTTGTTGCCG ATCACGCCGG TGGTTGATGA GCCGGATCCT GCGCAGGTGG GTGGTGAGGT CACTGTTGAT GTGGATGTTC CGGTTGATGT ACTTGCCGAT GCGGCTCCTG CGGTGGAGGA CACTGGTGAG TTAACTCGGG CGCAGGATGT GTCGGCGTTG ACTAAGGCGA CGAACGCGGT TCCGTTGGAT GCGGTGGTGG TGGATGCTGA GCGTCCTGTG GTGTCGGCGT CGATCACGGC TGCTGCTCAT CATGTCACGT TGGTGACGGT GCGTTCTGAT GGGAAGCGTC CTTCTGATTC GCTGGTGCGG GGCACTATTT CTGATGCGTC GCGTTATTGG TCGACCGCGA CGAGTGGAGT GGTGCGTGAG TTGCGTGTCA CGGGTTCTTA TTCGTTGACG TACAACGGGT ATTGTTCGGC GTCTCCGTGG AGCCTGTGGG ATCAGGCGAT GTCTGTGAGT GGTTTTGATG GTTCCTTGGC GCGTCATCAC CTTGTTGTGG TGGGGCCTGA GTGTTCTGGG GAAACACTGG GGGTGGGAAC TATTGGCGCG GGGTTGTCGA CGGGTGGTTT GCTGGCGATT TATGGGCCCT CATCGGAGAC GTTGATCCAC GAGATGGGGC ATAATTTTTC GCTTGGTCAC TCGAATTTAG CTGGTGAGCA CTCGACGAGC TCTGGTTCCA CCCGGTTTCC GTCGTATGAG TATTTGGGTT TTTACAGCCC GATGGCTGGT GGTGTGGGTG ATGTGTACGC GACTCCGGCG TTAGATACCG CCTATCAGCA TCTGCTGAAG GTTGCCCCGG CTGGGCGTCT CACGACGGTC CCTTCTGTTG GGAAGACGGT CACGCTCACT GCGGTGGGGT CGGCGAGTGG GGTGCAGGGG GCCACGTTTG TTGACCCGCA TTCGGGGTAC CGGGCTTACG TGGAGTATCG AAGCGGCCTC GGGGTGGATA GGCAGGCGTT TTACGCTGTT GAACCCGAGG GGCTCACGTC GTATGTGAAC ACTGTTCTGG GTGCTGGGGT TCGCGTGTCT CTTCTTGACC CGCACAGCAA TGACGTCATC ACGTTCACGT CCCCCACGAC TCCGCGGTAC GCAGCGCTGC TCACCAAGGG GGTGCCGGGT CCGGTGCGGA ACACCCTCGT TGGGTGGGGT GGCGGCTACA CGGTACAGGT GAACTCTCAC ACGGAGACGA CCGCGAATGT CACGATCACG CCGGGGAAGT CTCGTTCCTC GATTGTGTCG GCGAACAGCA AAGCCCACTA TGGGTCCACA CCAAAAGTGA GTGTGGGGGT GGACTCGATT ATCCCTGCCA CAGGAACGGT GGAAGCGTAT GTGGGTGGGA AAAAAGTGGC GTCTAAGGCG CTGCCCACCA GTGGGGTGCG GCGCACGACT CTTAACCTTC CGCGCACCCT TGCCGTGGGG AAGCACACCG TTGAGTTGAA GTACACCGGT TCCTCACGTG TCTACGCGTC CACCCGCAAG GTGACTGTCA CCGTGAGCAA GGCCCCCGTT GTTGTGAAAA CAGCGGTGAA AAATGCGCAT ATCAAGAAGA AACCTACCCT TGCGATCCGG GTCGCTGCGA ACGCGGTGCC CACCGGCAAG GTGCAAGTCA ACGTGGGGGG TAAAAAGTAC CGCACATTGA CCTTAACGAA AGGGCGCGCA ACCGTGACTT TGCCACGGGG GACGCGCATC GGTAAGCAAA AAATTGCGGT CATCTACAAG GGCGACAAGA ACCACACGAG TTCCATACTG CGCCGCACCT ACACGGTTAC CAAACAGCCC GCCGCGATTT CCGGGTTGAA AGGTGGCACC CGAACTGTCA CCCGGGGGCG CGTGTACAAA GACACGTTCA CGGTCACCCA CACCGCGAGC TTGCAACGGC GCACCACCGG ATCCTGGAGC ACCGTGAAGA CTCTCAAAGC AGGCAAACAC GTGCTGAAAC ATCGCGCGAA AACCACAAAG ACAGTGCAGT ATCGTGTGGT CATTAAGTCG ACCTCCACCC GTACGGCCGC GAAAAAAACC GTGACTCTGC GCGTCAAAAA ATAA
|
Protein sequence | MARPVEMRRL FVSVLVACVV STVGVAVPAG AAGGAHRESD SATTTVTVAG TLRAMVVHDE DRGEVSTHVL GEGARTGVDY AVEVDGALLP ITPVVDEPDP AQVGGEVTVD VDVPVDVLAD AAPAVEDTGE LTRAQDVSAL TKATNAVPLD AVVVDAERPV VSASITAAAH HVTLVTVRSD GKRPSDSLVR GTISDASRYW STATSGVVRE LRVTGSYSLT YNGYCSASPW SLWDQAMSVS GFDGSLARHH LVVVGPECSG ETLGVGTIGA GLSTGGLLAI YGPSSETLIH EMGHNFSLGH SNLAGEHSTS SGSTRFPSYE YLGFYSPMAG GVGDVYATPA LDTAYQHLLK VAPAGRLTTV PSVGKTVTLT AVGSASGVQG ATFVDPHSGY RAYVEYRSGL GVDRQAFYAV EPEGLTSYVN TVLGAGVRVS LLDPHSNDVI TFTSPTTPRY AALLTKGVPG PVRNTLVGWG GGYTVQVNSH TETTANVTIT PGKSRSSIVS ANSKAHYGST PKVSVGVDSI IPATGTVEAY VGGKKVASKA LPTSGVRRTT LNLPRTLAVG KHTVELKYTG SSRVYASTRK VTVTVSKAPV VVKTAVKNAH IKKKPTLAIR VAANAVPTGK VQVNVGGKKY RTLTLTKGRA TVTLPRGTRI GKQKIAVIYK GDKNHTSSIL RRTYTVTKQP AAISGLKGGT RTVTRGRVYK DTFTVTHTAS LQRRTTGSWS TVKTLKAGKH VLKHRAKTTK TVQYRVVIKS TSTRTAAKKT VTLRVKK
|
| |