| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_0278 |
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| Symbol | |
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| ID | 8379472 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jonesia denitrificans DSM 20603 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013174 |
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| Strand | + |
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| Start bp | 298643 |
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| End bp | 299629 |
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| Gene Length | 987 bp |
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| Protein Length | 328 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 645003012 |
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| Product | periplasmic binding protein/LacI transcriptional regulator |
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| Protein accession | YP_003160254 |
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| Protein GI | 256831527 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1879] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.11019 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCTGTCC GTACCCGTGC AATCCGCTTC GCAGGAATCG CCCTCGCCGG CACTCTTGCA
CTGAGTGTGT CCGCGTGCTC TGACAATGGC GAAGGTGGCG GTGACGAACT TGTCACTGTC
GGTTTTGTCG CCGTTGGTCC TGAAGGGGCC TGGCGTCAAG CCAACGAAAC CAACATCCAA
GAGTCATTCA CGGAGGAAGC AGGCTTCAAC TTGAAGTACG CTCCCGCCAC GAACCTTGAC
CAGAAATCCC AAATCGATGC GTTCACATCA TTTGTTGATG AAGGGGTGGA CGTCATTCTC
CTGTCGGCCA CTGAAGGGTC TGGGTGGGAA GACTCCCTGT CCCGTGCCCA AGAAGCCGAG
ATCCCGGTCA TCCTCATCGA CCGCGGAATT GAGCCTGACA ACACTGACCT TTACGTCACC
CGTATCGCCC CCGACAATAT CGCGGTGTCC ACGTCGGTTG CGGAATGGGC AAAAACTGCC
CTGCCAGAAG GTGGCAACTA CTTTGTCCTT GAGGGGCCAG CAGGTGTGTC TGTGGTCAAC
GAACGCAACG AAGGGTGGGA CGCTGTCATT GGCGCGGAAT CATCGTTCAC AAAACTCGGT
GCACAAACCG CGAACTGGTC CACAGAAGAA GCGAAAAGCG TCTTCGAAAC AGTGCTGAAG
TCGAACAACA ACGATGTTCA GCTTGTCTTC GCCCAGAACG ATGAAATGGG TCTTGGCGCT
GCGCAAGCTA TTGAAGAAGC CGGTCTCACC CCAGGTGAAG ACGTCAAAAT TGCCACCATT
GACGGCACGA AGGGTGCGCT CGAAGCTTTA GCCGCGGGTC GTCTCAGCTT CGTTGCCGAA
TACAACCCAC TGTTTGGTGA CGTGGCTGTC GACGTGGTGA ACAAGGTGCT CGATGGGGAA
AGCGTTGAAC CATACATCAT CGCTGAGTCG TTGACGTTTG ACTCCCCAGA AGCGGCACAG
GAAGCGTTGC CTGACCGCAA GTTCTAG
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| Protein sequence | MSVRTRAIRF AGIALAGTLA LSVSACSDNG EGGGDELVTV GFVAVGPEGA WRQANETNIQ
ESFTEEAGFN LKYAPATNLD QKSQIDAFTS FVDEGVDVIL LSATEGSGWE DSLSRAQEAE
IPVILIDRGI EPDNTDLYVT RIAPDNIAVS TSVAEWAKTA LPEGGNYFVL EGPAGVSVVN
ERNEGWDAVI GAESSFTKLG AQTANWSTEE AKSVFETVLK SNNNDVQLVF AQNDEMGLGA
AQAIEEAGLT PGEDVKIATI DGTKGALEAL AAGRLSFVAE YNPLFGDVAV DVVNKVLDGE
SVEPYIIAES LTFDSPEAAQ EALPDRKF
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