Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jden_0276 |
Symbol | |
ID | 8381722 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jonesia denitrificans DSM 20603 |
Kingdom | Bacteria |
Replicon accession | NC_013174 |
Strand | + |
Start bp | 295763 |
End bp | 296791 |
Gene Length | 1029 bp |
Protein Length | 342 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 645003010 |
Product | transcriptional regulator, LacI family |
Protein accession | YP_003160252 |
Protein GI | 256831525 |
COG category | [K] Transcription |
COG ID | [COG1609] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.32606 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTGTCAG AGAAGCCACC AGGGACAAAA CCCAATATTC GGCAGGTTGC TGCCGCTGCT GGGGTGTCCC ATATGACGGT GTCGCGGGTG TTGAATGACC ACCCGAACAT TAAGGACTCA ACGCGGCGCA AGGTGTTGCG CGTTATTGAG GAACTGAACT ATCGGCCGAA TGGTGCGGCA CGTGCATTAG CAACGCAGCG GAGCCAGCGC ATCGGCGTCA TGATTGAAAG TGCGCGCGAG TTTGGTCCGT TGTACACGTT GCGGGCGGTG GAGGATGCGG CGCGTGCGGC GGGGTTTGGC GTGACGTCGG TGCCGTTGGC TGAGCATGGG GCGTTTGCGG CGCGTGATGC CATGGATTAT TTGGTGAGCC AGGGTGTTGA TGCGGTGTGT GTGATTGCGC CTCGGTCGTC GTCGTTGGCT GCGTTACGGC AGGTGTCGGT GGACGTGCCG ATGTTGGTGG TGAAGAGCAG TGGTGATCCG CATTATTTGA CGGTGGGTGT GGACCAGCAG TTGGGTGCGG AGCTGGTTGT GGATCATGTG GCGGGGTTGG GGCATCGTGA TGTGTTGCAT CTTGCGGGCC CGTTGGATTG GTTGGATGCG CGTGCCCGTG AGCGGGCTTT TCATGCACGG TCACGGCAGT GGGGGTTGAA GGAGCGGCCC ATTGTTGTGG GGGATTGGAG TGCGGACTTT GGGTATGACT TTGTGAAGAG TATGAAGCGA AAACCTGATT ACACAGCGAT CTTCGCAGCG AATGATGCGA TGGCGATGGG GTTGTTGCAT GGGTTTGCGG AGTGGGGTGT GGAGGTTCCC GCGCAGATGT CAGTGGTGGG GTTCGATGAT GTGCCATTGA GTCGTCATGC GATTCCGCCA TTGACGACGG TACGGCAGGA TTTCGATGTG GTGGGGTTGA AGGTGGTGGA GGTGTTGACG GCGGCGGTTC GAGGTGGTGA GGTCCCGGCC CGAACGACTG TGGGTGTTGA GGTGGTGGTT CGGGAATCGT CGGCGCCGGT GGGCGGTGTG GCGTTGTGA
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Protein sequence | MVSEKPPGTK PNIRQVAAAA GVSHMTVSRV LNDHPNIKDS TRRKVLRVIE ELNYRPNGAA RALATQRSQR IGVMIESARE FGPLYTLRAV EDAARAAGFG VTSVPLAEHG AFAARDAMDY LVSQGVDAVC VIAPRSSSLA ALRQVSVDVP MLVVKSSGDP HYLTVGVDQQ LGAELVVDHV AGLGHRDVLH LAGPLDWLDA RARERAFHAR SRQWGLKERP IVVGDWSADF GYDFVKSMKR KPDYTAIFAA NDAMAMGLLH GFAEWGVEVP AQMSVVGFDD VPLSRHAIPP LTTVRQDFDV VGLKVVEVLT AAVRGGEVPA RTTVGVEVVV RESSAPVGGV AL
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