Gene Jden_0276 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJden_0276 
Symbol 
ID8381722 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJonesia denitrificans DSM 20603 
KingdomBacteria 
Replicon accessionNC_013174 
Strand
Start bp295763 
End bp296791 
Gene Length1029 bp 
Protein Length342 aa 
Translation table11 
GC content60% 
IMG OID645003010 
Producttranscriptional regulator, LacI family 
Protein accessionYP_003160252 
Protein GI256831525 
COG category[K] Transcription 
COG ID[COG1609] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.32606 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTGTCAG AGAAGCCACC AGGGACAAAA CCCAATATTC GGCAGGTTGC TGCCGCTGCT 
GGGGTGTCCC ATATGACGGT GTCGCGGGTG TTGAATGACC ACCCGAACAT TAAGGACTCA
ACGCGGCGCA AGGTGTTGCG CGTTATTGAG GAACTGAACT ATCGGCCGAA TGGTGCGGCA
CGTGCATTAG CAACGCAGCG GAGCCAGCGC ATCGGCGTCA TGATTGAAAG TGCGCGCGAG
TTTGGTCCGT TGTACACGTT GCGGGCGGTG GAGGATGCGG CGCGTGCGGC GGGGTTTGGC
GTGACGTCGG TGCCGTTGGC TGAGCATGGG GCGTTTGCGG CGCGTGATGC CATGGATTAT
TTGGTGAGCC AGGGTGTTGA TGCGGTGTGT GTGATTGCGC CTCGGTCGTC GTCGTTGGCT
GCGTTACGGC AGGTGTCGGT GGACGTGCCG ATGTTGGTGG TGAAGAGCAG TGGTGATCCG
CATTATTTGA CGGTGGGTGT GGACCAGCAG TTGGGTGCGG AGCTGGTTGT GGATCATGTG
GCGGGGTTGG GGCATCGTGA TGTGTTGCAT CTTGCGGGCC CGTTGGATTG GTTGGATGCG
CGTGCCCGTG AGCGGGCTTT TCATGCACGG TCACGGCAGT GGGGGTTGAA GGAGCGGCCC
ATTGTTGTGG GGGATTGGAG TGCGGACTTT GGGTATGACT TTGTGAAGAG TATGAAGCGA
AAACCTGATT ACACAGCGAT CTTCGCAGCG AATGATGCGA TGGCGATGGG GTTGTTGCAT
GGGTTTGCGG AGTGGGGTGT GGAGGTTCCC GCGCAGATGT CAGTGGTGGG GTTCGATGAT
GTGCCATTGA GTCGTCATGC GATTCCGCCA TTGACGACGG TACGGCAGGA TTTCGATGTG
GTGGGGTTGA AGGTGGTGGA GGTGTTGACG GCGGCGGTTC GAGGTGGTGA GGTCCCGGCC
CGAACGACTG TGGGTGTTGA GGTGGTGGTT CGGGAATCGT CGGCGCCGGT GGGCGGTGTG
GCGTTGTGA
 
Protein sequence
MVSEKPPGTK PNIRQVAAAA GVSHMTVSRV LNDHPNIKDS TRRKVLRVIE ELNYRPNGAA 
RALATQRSQR IGVMIESARE FGPLYTLRAV EDAARAAGFG VTSVPLAEHG AFAARDAMDY
LVSQGVDAVC VIAPRSSSLA ALRQVSVDVP MLVVKSSGDP HYLTVGVDQQ LGAELVVDHV
AGLGHRDVLH LAGPLDWLDA RARERAFHAR SRQWGLKERP IVVGDWSADF GYDFVKSMKR
KPDYTAIFAA NDAMAMGLLH GFAEWGVEVP AQMSVVGFDD VPLSRHAIPP LTTVRQDFDV
VGLKVVEVLT AAVRGGEVPA RTTVGVEVVV RESSAPVGGV AL