| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_0273 |
|---|
| Symbol | |
|---|
| ID | 8379467 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Jonesia denitrificans DSM 20603 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013174 |
|---|
| Strand | + |
|---|
| Start bp | 293993 |
|---|
| End bp | 294442 |
|---|
| Gene Length | 450 bp |
|---|
| Protein Length | 149 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 645003006 |
|---|
| Product | Roadblock/LC7 family protein |
|---|
| Protein accession | YP_003160249 |
|---|
| Protein GI | 256831522 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2018] Uncharacterized distant relative of homeotic protein bithoraxoid |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 0.400039 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCACGC TCAGCACCGA GGCAACGAAC TTCGGTTGGT TGCTGGACAA CTTTGTGCGG
ACAGTTCCGG CCACACGCCA CACCCTTGTG GTCTCGGCTG ACGGCCTGTT AATGGCGATG
TCCGATAACC TCGACCGGAC CAGCGGTGAC CAGCTCGCCG CAATCGTGTC CGGCATGTCA
AGCCTCACCC GTGGGGCCTC ACGCCAACTC AACGGTGGGG CGGTTCGCCA GGCCATCGTG
GAAATGGACA ATGGCTTCCT CTTCTTGATG AACGTCTCGA ACGGATCAGT TCTTGCCGTC
GTCGCTGATT CCTCATGCGA CGTTGGTCTG ATCGGATATG AGATGGCTAT GCTCGTATCA
CGAACTGAAG CAACTCTCAC ACCACAACTG ATCTCAGAGA TGCGCGGCTC GCTGCCGGTA
GACGGAGCTA CACGCGCGCA AATGGGATAG
|
|---|
| Protein sequence | MSTLSTEATN FGWLLDNFVR TVPATRHTLV VSADGLLMAM SDNLDRTSGD QLAAIVSGMS
SLTRGASRQL NGGAVRQAIV EMDNGFLFLM NVSNGSVLAV VADSSCDVGL IGYEMAMLVS
RTEATLTPQL ISEMRGSLPV DGATRAQMG
|
|---|
| |