Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jden_0268 |
Symbol | |
ID | 8379463 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jonesia denitrificans DSM 20603 |
Kingdom | Bacteria |
Replicon accession | NC_013174 |
Strand | + |
Start bp | 286608 |
End bp | 287612 |
Gene Length | 1005 bp |
Protein Length | 334 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 645003002 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_003160245 |
Protein GI | 256831518 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1175] ABC-type sugar transport systems, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.142528 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.163523 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATCTGC TGTACGCCGA CACAACCGGC GGCAAGCTAC TCCTCATGGT CATTGCTATT GCGATGTTCG TCGCAGTGAT GGCTCTTATT CTGTTTGCCG TGGAACGTAT TCCCCGGGCG CCGCGTTGGG TGGTTGTTGC CGCCTTTACC GGCCCTGCAT TGTTGGGTAT TTCCTTTGGG TTGATTTACC CCGCAATCCT CACCGCACGA AGCTCGCTTT ATGATGCCCG TGGCCAAAAC TTCATTGGGG TCGACAACTA CGTCACCGCC TTTACCCGCC CCGAGTTTCA ACAGGTGCTT CTCAACACCA TTGCCTGGAC CATTATTGTC CCGGTGTTGT CCACTGCGAT CGGTCTCATC TACGCGGTCC TCGTCGACCG GGCTCGGTTT GAAAAGATCG CAAAAACCTT GCTGTTCATG CCCATGGCGA TCTCCCTTGT GGGCGCTTCG ATCATCTGGA AGTTCGTCTA CGAATACCGG CCTGTCCTTG AGGGGGTCGC CCCAGACCGG CAACCCGCAC AAATTGGGTT ACTCAACCAA ATCCTGGTGT GGATGGGTCT AGAACCGGTT CAGTTCCTGC TCAATGGACC GTGGAATAAC TTATTCCTCA TGATCGTCAT GATCTGGATT CAAGCAGGTT TCGCCATGAC AATTTTGTCC GCGGCGATCA AGGCGATCCC CACAGAAACC AACGAGGCAG CCACCCTGGA TGGGGTCAAT GGACCGCAGT TGTTCTTCTA CGTCACCGTC CCCAGTGTGC GACCAGCATT GGTCGTTGTG CTCACCACCA TCGCAATGGG CACTCTCAAA GTGTTCGACA TTGTCCGGAC AATGACGGGT GGAAACTACG GCACCCAAGT GGTGGCAAAC GAGTTCTACA CCCAGTCCTT TCGGCAACAA AACCAAGGGA TGGGTGCAGC GCTGGCGGTA TTGCTCTTCG CTTTCGTGGT GCCACTCATC ATTTACAACG TCCGCCAAAT GAAGAAGTCG GAGGAGGTCC GATGA
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Protein sequence | MDLLYADTTG GKLLLMVIAI AMFVAVMALI LFAVERIPRA PRWVVVAAFT GPALLGISFG LIYPAILTAR SSLYDARGQN FIGVDNYVTA FTRPEFQQVL LNTIAWTIIV PVLSTAIGLI YAVLVDRARF EKIAKTLLFM PMAISLVGAS IIWKFVYEYR PVLEGVAPDR QPAQIGLLNQ ILVWMGLEPV QFLLNGPWNN LFLMIVMIWI QAGFAMTILS AAIKAIPTET NEAATLDGVN GPQLFFYVTV PSVRPALVVV LTTIAMGTLK VFDIVRTMTG GNYGTQVVAN EFYTQSFRQQ NQGMGAALAV LLFAFVVPLI IYNVRQMKKS EEVR
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