Gene Jden_0268 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJden_0268 
Symbol 
ID8379463 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJonesia denitrificans DSM 20603 
KingdomBacteria 
Replicon accessionNC_013174 
Strand
Start bp286608 
End bp287612 
Gene Length1005 bp 
Protein Length334 aa 
Translation table11 
GC content55% 
IMG OID645003002 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_003160245 
Protein GI256831518 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1175] ABC-type sugar transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.142528 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.163523 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATCTGC TGTACGCCGA CACAACCGGC GGCAAGCTAC TCCTCATGGT CATTGCTATT 
GCGATGTTCG TCGCAGTGAT GGCTCTTATT CTGTTTGCCG TGGAACGTAT TCCCCGGGCG
CCGCGTTGGG TGGTTGTTGC CGCCTTTACC GGCCCTGCAT TGTTGGGTAT TTCCTTTGGG
TTGATTTACC CCGCAATCCT CACCGCACGA AGCTCGCTTT ATGATGCCCG TGGCCAAAAC
TTCATTGGGG TCGACAACTA CGTCACCGCC TTTACCCGCC CCGAGTTTCA ACAGGTGCTT
CTCAACACCA TTGCCTGGAC CATTATTGTC CCGGTGTTGT CCACTGCGAT CGGTCTCATC
TACGCGGTCC TCGTCGACCG GGCTCGGTTT GAAAAGATCG CAAAAACCTT GCTGTTCATG
CCCATGGCGA TCTCCCTTGT GGGCGCTTCG ATCATCTGGA AGTTCGTCTA CGAATACCGG
CCTGTCCTTG AGGGGGTCGC CCCAGACCGG CAACCCGCAC AAATTGGGTT ACTCAACCAA
ATCCTGGTGT GGATGGGTCT AGAACCGGTT CAGTTCCTGC TCAATGGACC GTGGAATAAC
TTATTCCTCA TGATCGTCAT GATCTGGATT CAAGCAGGTT TCGCCATGAC AATTTTGTCC
GCGGCGATCA AGGCGATCCC CACAGAAACC AACGAGGCAG CCACCCTGGA TGGGGTCAAT
GGACCGCAGT TGTTCTTCTA CGTCACCGTC CCCAGTGTGC GACCAGCATT GGTCGTTGTG
CTCACCACCA TCGCAATGGG CACTCTCAAA GTGTTCGACA TTGTCCGGAC AATGACGGGT
GGAAACTACG GCACCCAAGT GGTGGCAAAC GAGTTCTACA CCCAGTCCTT TCGGCAACAA
AACCAAGGGA TGGGTGCAGC GCTGGCGGTA TTGCTCTTCG CTTTCGTGGT GCCACTCATC
ATTTACAACG TCCGCCAAAT GAAGAAGTCG GAGGAGGTCC GATGA
 
Protein sequence
MDLLYADTTG GKLLLMVIAI AMFVAVMALI LFAVERIPRA PRWVVVAAFT GPALLGISFG 
LIYPAILTAR SSLYDARGQN FIGVDNYVTA FTRPEFQQVL LNTIAWTIIV PVLSTAIGLI
YAVLVDRARF EKIAKTLLFM PMAISLVGAS IIWKFVYEYR PVLEGVAPDR QPAQIGLLNQ
ILVWMGLEPV QFLLNGPWNN LFLMIVMIWI QAGFAMTILS AAIKAIPTET NEAATLDGVN
GPQLFFYVTV PSVRPALVVV LTTIAMGTLK VFDIVRTMTG GNYGTQVVAN EFYTQSFRQQ
NQGMGAALAV LLFAFVVPLI IYNVRQMKKS EEVR