Gene Jden_0238 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJden_0238 
Symbol 
ID8379433 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJonesia denitrificans DSM 20603 
KingdomBacteria 
Replicon accessionNC_013174 
Strand
Start bp252980 
End bp253951 
Gene Length972 bp 
Protein Length323 aa 
Translation table11 
GC content62% 
IMG OID645002972 
ProductROK family protein 
Protein accessionYP_003160215 
Protein GI256831488 
COG category[G] Carbohydrate transport and metabolism
[K] Transcription 
COG ID[COG1940] Transcriptional regulator/sugar kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGAAG TGGTAACGGA CATTCTTGTC CTGGCACTCG ATATTGGTGG CACCAACAGC 
CGTGGTGAAG TGCTGCGCTG GGGTTCAGGG ACTCTGAGTG AACCACTCGC GCAGGCGTCG
TTGCCGACCC CGTCTGGGGA CGGCGACGGG GCCGTGAACA CCATCATCAC GTTGTGTCGC
ACGTTGCTAG GGGCACTTGA CGAACCGACT CGCGCGCTTG TTGCAGGCAT CGGGTTGGGT
GTTCCTGGCG TGCTGGACAC TGACCGTGGT GTGGTGACAC TTGCGTCAAA CGTGGGGTGG
GTGAACCGAC CTATTTGCGC TGACATTGAG GCAGCGGTGG GGCTCCCGGT GTATTTAACT
CACGATGTGA CCGCTGCGGG TGCAGCGGAG CAACGCTTAG GTGCCGGGCG TGGTTGTGAT
GATGTCATTG CCGTGTTCTT AGGAACAGGT ATTGCCGCGT CCATTACCTC TGGTGGTCAT
CTGGTCACTG GGGGTGTGCT CCCTGGTGGG GGCAGGCAAC CAGCAGGGGA GATCGGGCAC
CTGCCCGTTG ATGTGCATGG GCCGTTGTGT TCGTGTGGTC AGCGAGGGTG TTTGGAGTTG
ATGAGCTCCG CGCGTGCCAT TGGACGCCGG TACAGTGTTG CCCGTGGTGT CGACCCGGAT
GGGCCAGATG CGTTGACGTC ACGGGATGTG GTGGCTGCGT TGGGCACCGA CCCGGTCGCG
AAAGATGTGT GGGACGATGC CACCCGCTAC CTTGCGCACG GGTTGTTGGC CGTGACAATT
GCTGTGGGGG CCACCCGGAT CATCATGGGG GGTGGTTTAT CCCAGGCGGG CCGGGTGCTC
ACAGATTCAG TGCGTGCGCA TTTGGTGGAG CAGACACGGG TCGCGTCCGT TCCAGAGATT
GTGACTGCTC AACTGGGGCA ACGCGCCGGT GTGCTCGGGG TTGCCCTGCA CGCCTTGGAC
CAGATTGTGT GA
 
Protein sequence
MAEVVTDILV LALDIGGTNS RGEVLRWGSG TLSEPLAQAS LPTPSGDGDG AVNTIITLCR 
TLLGALDEPT RALVAGIGLG VPGVLDTDRG VVTLASNVGW VNRPICADIE AAVGLPVYLT
HDVTAAGAAE QRLGAGRGCD DVIAVFLGTG IAASITSGGH LVTGGVLPGG GRQPAGEIGH
LPVDVHGPLC SCGQRGCLEL MSSARAIGRR YSVARGVDPD GPDALTSRDV VAALGTDPVA
KDVWDDATRY LAHGLLAVTI AVGATRIIMG GGLSQAGRVL TDSVRAHLVE QTRVASVPEI
VTAQLGQRAG VLGVALHALD QIV