Gene Jden_0230 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJden_0230 
Symbol 
ID8379425 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJonesia denitrificans DSM 20603 
KingdomBacteria 
Replicon accessionNC_013174 
Strand
Start bp244493 
End bp245281 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content47% 
IMG OID645002964 
ProductABC-2 type transporter 
Protein accessionYP_003160207 
Protein GI256831480 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0145585 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAACGGCT TGTATGATCC GATTAAAACG GCGTTGAAGA TTTCGAAGGT GTCGAGTCCT 
GAACTTACTA ATAGTTCTAC TGCGGTGACA TCGTTGATTT TTGTTCCTTT GTTTGAGGTA
ATTCTCCTCG TTGCTATTAC TGCTTCTGTG GGAAGCGTTG ATCTCATTTC TGTTGCTTAT
TCTGCTATAG TCTTGGCATT AGGGCTAACG ATTATAACGG GTACCGTCGG ACAAGTTACT
AGAGATCGTA ACTTAGGAGT GCTAAATGAA ATGCTCATAT ATCGCTTCTA CTATGCACCA
TACTGGTTGA GTAAAGTCTG CGTTTCGGCA ATCCTGGGTC TTGTCGTTGC AATGCTTTCG
TCAGTTGTCG TATTTGCTAT GGCCGCTGAG AATAATGCAA GTTCTCTGTT TTCTATCCTC
GCTTTTTTGC CCTTTGTTGC GTTTTGCGCA AGCTTGGCAG CGATTGGTGT TTCAACGCTT
TCAATTGGTT TGCGTGACCC GTATTTCGTT TCAAATATTG TGCAAGGCTT ACTTCCTCTT
ACGGCTGGTG TAGTTGTTCC CTTGTCCTCT TACCCCACGG TGCTTCAGAG CATTGCGTAT
GTATTGCCAT TCACCGGTGC GATCGAGGCT ATGCGCGGGC TCGCCAGTGG CCAACATTTT
TCCGCTGTGT CAGTTTTCCT CATGCGCGAA CTAGTCGTTT GTGGAGGATG GCTCCTTGTT
GGAGTGCTCA CTAGCGCAAC AGTTGTCCGA GCCATTCGCG AGGGTCGGAG ACGAGAGGAT
ATCTGGTGA
 
Protein sequence
MNGLYDPIKT ALKISKVSSP ELTNSSTAVT SLIFVPLFEV ILLVAITASV GSVDLISVAY 
SAIVLALGLT IITGTVGQVT RDRNLGVLNE MLIYRFYYAP YWLSKVCVSA ILGLVVAMLS
SVVVFAMAAE NNASSLFSIL AFLPFVAFCA SLAAIGVSTL SIGLRDPYFV SNIVQGLLPL
TAGVVVPLSS YPTVLQSIAY VLPFTGAIEA MRGLASGQHF SAVSVFLMRE LVVCGGWLLV
GVLTSATVVR AIREGRRRED IW