Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jden_0228 |
Symbol | |
ID | 8379423 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jonesia denitrificans DSM 20603 |
Kingdom | Bacteria |
Replicon accession | NC_013174 |
Strand | + |
Start bp | 242770 |
End bp | 243744 |
Gene Length | 975 bp |
Protein Length | 324 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 645002962 |
Product | ABC transporter related |
Protein accession | YP_003160205 |
Protein GI | 256831478 |
COG category | [V] Defense mechanisms |
COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.00487637 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATAAAA CTGTTCTTAT TGCTAACGAT CTTAGACGAG AGTTTCGTTC AAAGGGGGAA AAGAAATCAA TCAACGCAGT TGATGGAGTC AACCTGCGTA TAGACCCTGG CGAAACGTTG TGCTTACTTG GACCGAATGG GGCGGGAAAG ACAACTTCGA TAAAAATGAT ATCAACACTG TTAATGCCTA CTGGAGGTGA AATAACAATT GATGGCATTA ACGCCGTGAA ATCTCCGCAG GAAGCACGCT CGCGGCTCGG GTTGGTTCTA GGAGGAGAAC GTGGGTTTTA TCTTCGTGCA ACAGCTAGGG ATAACCTACT CTTTTTCGCA GATATTCTGG ATGTTCCTCG TCGTGAGCGT GCGCGTCGAG TCGATTATGC GTTAGATGCT GTCGCGCTAA CACATGTCAG TCGAAGTCCT GTAGAAGAGT TCTCAAGAGG AATGCGTCAG CGATTGCATA TTGCTCGGGC GTTGCTTAAT GAACCTAAAC TTCTACTTCT TGATGAACCA ACGGTTGGTT TGGACCCGGA GGCGGCCCGC GACGTCAGAC AACTGGTGCG TGAATTGACT TCGACAGGAA CCGCGGTTCT GTTAACGACA CACTATCTTT TTGAAGCTGA ACAGTTAGCG GACTCAATTG CACTTATCAT GAACGGAAAG ATTGAGATCA CCGGCGATGT TGCGGCTATA GCAAAGCACT CAGGGATTAC AACCATCACC ACGTTATCTC TCTCTGAGCT ACTAGATCGT GAATTGAAAG TGTTGCAGGC GATTAATGGT CTGGGGCAAA TTAGAAGTGA AACTAGAGGA AATAGAACGT ATTTATACCT CCCCTGGGAG GGTTTTCCTT ATGTTGAAAG AGTTTCTACA GTGCTCGAGG AATTGCGTGG TTCGGTCCCT GAAGATTTCC ACACCCGTCC AGCTACCTTG GAGGAAAGCT ACCTCACGCT TGTGGACGAG GTGGTGAATA TATGA
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Protein sequence | MNKTVLIAND LRREFRSKGE KKSINAVDGV NLRIDPGETL CLLGPNGAGK TTSIKMISTL LMPTGGEITI DGINAVKSPQ EARSRLGLVL GGERGFYLRA TARDNLLFFA DILDVPRRER ARRVDYALDA VALTHVSRSP VEEFSRGMRQ RLHIARALLN EPKLLLLDEP TVGLDPEAAR DVRQLVRELT STGTAVLLTT HYLFEAEQLA DSIALIMNGK IEITGDVAAI AKHSGITTIT TLSLSELLDR ELKVLQAING LGQIRSETRG NRTYLYLPWE GFPYVERVST VLEELRGSVP EDFHTRPATL EESYLTLVDE VVNI
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