Gene Jden_0221 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJden_0221 
Symbol 
ID8379416 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJonesia denitrificans DSM 20603 
KingdomBacteria 
Replicon accessionNC_013174 
Strand
Start bp235636 
End bp236397 
Gene Length762 bp 
Protein Length253 aa 
Translation table11 
GC content59% 
IMG OID645002955 
ProductABC transporter related 
Protein accessionYP_003160198 
Protein GI256831471 
COG category[V] Defense mechanisms 
COG ID[COG1131] ABC-type multidrug transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.207021 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATATTA GTGCAGCGCG ACTGGCGCAT AGCTACGGTG GTCACAACGT GCTAGGGCCC 
CTGGATGCAA CATTTGGTCC AGGGGTTACT GGTGTGTTGG GGCCAAACGG GGCAGGGAAG
AGTACCCTGC TGCGGATTAT TGCCACTGCG ACGCGGCCTA GTGTCGGTAG ATTGCAGTTC
GACGGGCAAG AGCTCAGGGG TGTCAGATCG ATACGACAGG CTCGCACCAC CATTGGGTAC
CTGCCCCAAG ACGTGGCGTT CTATCCGGAC TTTACGGTTG AGGATGCTAT TCACTACGCA
GGTTGGCAGC GAGGGGTCTC ACGCCATCAG CGCCGAACAC AGGTGCCTGA GATCGTCGCT
GAGGTTGGGC TTGCCGACCA AACCACAGTT CCTGTCAAAA AGCTATCTGG AGGTATGCGG
CAACGTGTAG GGCTCGCATC CGCCCTCATT GGTGACCCCC GCATTCTTCT TCTTGATGAA
CCCACAGTGG GGCTGGATCC CGCTCAGCGG CTCGACTTTC GGGCCGCTAT CCGCAGGAGG
CCACACGCAA CGACAATCGT GTCGACACAC CTTGTTGAAG AGGTTCGTGC ACTGTGCGAC
CGAGTGCTTG TCGTCAACAA AGGGGCGGTA CTTTTTGACG GAACCCCTCA GGAACTTGCA
CAGCTAGGCG ACCAAATCCC CGTCGACGCG CAGGATATGG GGGACAGCCC CATGGAACGT
GGATACATGG CAGCTCTACA CCCAGGGGTG CTGCGTGGGT AA
 
Protein sequence
MHISAARLAH SYGGHNVLGP LDATFGPGVT GVLGPNGAGK STLLRIIATA TRPSVGRLQF 
DGQELRGVRS IRQARTTIGY LPQDVAFYPD FTVEDAIHYA GWQRGVSRHQ RRTQVPEIVA
EVGLADQTTV PVKKLSGGMR QRVGLASALI GDPRILLLDE PTVGLDPAQR LDFRAAIRRR
PHATTIVSTH LVEEVRALCD RVLVVNKGAV LFDGTPQELA QLGDQIPVDA QDMGDSPMER
GYMAALHPGV LRG