Gene Jden_0202 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJden_0202 
Symbol 
ID8379397 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJonesia denitrificans DSM 20603 
KingdomBacteria 
Replicon accessionNC_013174 
Strand
Start bp219272 
End bp220030 
Gene Length759 bp 
Protein Length252 aa 
Translation table11 
GC content58% 
IMG OID645002936 
Productprotein of unknown function DUF540 
Protein accessionYP_003160179 
Protein GI256831452 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2981] Uncharacterized protein involved in cysteine biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAGGGA TGCGGTGGCT CCTCAAACGG CCTAAGCTCC TCATTCTTGG GATGATGCCA 
GCCGTATTAG TCACTCTGAT CTTGTTGGCA CTGCTGATCG CCTTGCTTGT GAACATTGTG
TCCATCACGA TGTTCCTCAC CCCCTTCGCA CAAGACTGGG CCACCGGGTG GATGTGGACC
GTGCGCATTG TGACCGCCAT TGGTGTTATT GGGCTTGCGC TCGGACTCAG CGCGGCCCTC
TTCACTGCAC TCGCCCTGAT GATTGGTGAC CCGATCTACC AAAAGATCTG GGAAGAAGTC
GAACGCGACA TTCACGGCGA AGTACCAGAC CAAGAACCCG GGTTCTTCCA AGGCATCAAA
GACGGCTGGG CGCTCGCATG GCGGTCAGTG CTTTTTGCCC TTGGATGCAC GCTCATCAGC
CTGATTCCCG TCCTAGGCCC AGCAACTGCT GGCGCACTGA ACCTCAGCGC CGCAGCCTGG
CTCCTCACCC TCGAAACCGC CAGCCGCTCA CTAACAGCGC ACGGCGTCCC AGAAAAGGAC
CGCCGCAGAT GCCTCCGCCA ACAAACCCCC ATGACCCTCG GGTTTGGGTT CACCATCAGC
GGCGTCTACA CCATCCCACT GGGGGCAATA CTGTTCATGC CAGCGGTTGT TGTAGGGAGC
ACGATGCTCG CGCATCGTGT GATGGAACTT AGCAACTACC AGCTGCCCGC AGCAACCGAC
AAAAACCCGC CTCCCATGCC GGGCATGATC AACCTCTAA
 
Protein sequence
MEGMRWLLKR PKLLILGMMP AVLVTLILLA LLIALLVNIV SITMFLTPFA QDWATGWMWT 
VRIVTAIGVI GLALGLSAAL FTALALMIGD PIYQKIWEEV ERDIHGEVPD QEPGFFQGIK
DGWALAWRSV LFALGCTLIS LIPVLGPATA GALNLSAAAW LLTLETASRS LTAHGVPEKD
RRRCLRQQTP MTLGFGFTIS GVYTIPLGAI LFMPAVVVGS TMLAHRVMEL SNYQLPAATD
KNPPPMPGMI NL