| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_0198 |
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| Symbol | |
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| ID | 8379393 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jonesia denitrificans DSM 20603 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013174 |
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| Strand | + |
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| Start bp | 214156 |
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| End bp | 216405 |
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| Gene Length | 2250 bp |
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| Protein Length | 749 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 645002932 |
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| Product | glycoside hydrolase family 3 domain protein |
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| Protein accession | YP_003160175 |
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| Protein GI | 256831448 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1472] Beta-glucosidase-related glycosidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCACAC CACTTCCATA CCGTGACCCC ACCTTGCCGA TCCAGCAACG CGTCACCGAC
CTGCTCTCCC GCATGAGCCG CGAAGAAAAA GTCGGGCAAA TGATGCAACT CGATGCACGG
GATAACCTCG ATCACCTCAT CAACACGGTG CACGTCGGCT CAATCCTTCA CACCTCACCA
GATGCCCTGC GCGAAGCGCA CACCCTGGTA GAACGCACCC CTTTAGGAAT CCCCCTCCTC
GTTGGTGAAG ACTGCATCCA CGGGCATTCC TTCTTTGAGG GAACCACGAT CTTCCCCACC
CAACTGGGCA TGGCAGCGTC CTGGAACGCT CCACTCATCG AACAAGCAGC CCGCGTCACC
GCGGTTGAAG CATCCGCAAC CGGTATCCAC TGGACGTTCT CACCCGTCCT GTGCATAGCC
CGTGACCTGC GGTGGGGCCG CGTCAACGAA ACCTTCGGGG AAGACCCCCA CCTCATCGGT
GAACTCGCCA GCGCCATGGT GCGCGGGTAC CAAGGTGACG GTCTGACCGA CCACACCGCA
ATCCTCGCCA CCGCAAAACA CTTCGCTGCC TACTCAGAAA CCCAAGGTGG ACGTGACGCA
TCTGAAGCGG ACGTGTCCCA ACGCAAAATG CGCTCCTGGT TCCTGCCACC CTTCGAACGC
GTCGCCCGTG AGGGGTGCCG CACGTTCATG CTTGGCTACC AAACCACGGA CGGGGTGCCC
ATCACTATCA ACTCGTGGCT CCTCGATGAT GTCCTCCGCG GCGAATGGGG ATACACCGGG
ATGCTCATCA CCGACTGGGA CAACGTTGGG CGCATGGTGT GGGAACAACA GGTCATGCCC
GACCACACGC ACGCGGCTGC CGCTGCGGTG AAAGCCGGAA ACGACATGGT GATGACCACC
CCACAATTCT TCGATGGCGC CCTTCGCGCC CTTGACCAGG GGCTACTGAC TGACGCTGAT
GTTGATGCGG CAGTCTCCCG CATCCTCACC GTGAAGTTCG AACTGGGGCT CTTTGAGAAC
CCGCGGCGCC CCAACCCGGA ACGTATCGCC ACCGCACTGG CCACACCCGA CCACACGGCC
ATCAACCGTG ACCTCACCCG CCGCTCCTTG GTCCTGCTCG CCAACGACGG CACCCTGCCA
CTCGACGCCA CCTTAGAGGT CAGCAAAAAA ATCGCGGTCA TTGGCCCTAA CGCGAACGAC
CACCAATACC AACTTGGGGA CTGGGCAGGG AACTCTGGCC AAGCCGGATG GATGCCCGAC
GGCCACCTCA CCAACCAGAT CACCACCGTC TACGAAGGTC TGCGTGACAT TGTCCCAGAC
ACCTGGACTG TCACCCACGC CCGCGGCGCG AACATCGTTG ACCTGGTCGA CGACCCAGCG
GGAACGCACT TCCCCGACGG TCAACCCCGC CCGCGCATCG CCCAACCGGC GCCCATCGAC
GAGGCGCTCC ACAACGAAGC GTTGGCCGCA GCCAACAACG CCGATTACAT CGTTGCCGTT
GTCGGTGACG CCATCCCCCT CGTTGGCGAA GGCAGGTCCA CCGCAACCCT CAACCTCCTC
GGCGGGCAAG AACAGCTCCT CAACGACCTT GCCGCCACCG GCAAACCCCT CATCGTGGTG
CTCCTCGCCT CCAAACCACT GGTTCTGCCA CCCTCCGCGC TGAACGCAAA CGCCATCATC
TGGGCGGCAA ACCCTGGGAT GCGCGGCGGG CAAGCGCTCG CCGAACTGAT CACTGGGGCC
ATTGAACCAG CGGGCCGCTT GCCGATCAGC TTCGCCCGGC ACGTGGGGCA GCAACCCACG
TATTACAACC AGATTCGTGG CCAGCATGGT GACCGGTATG CGGACCTTAC CCAAGACCCA
CAGTGGGCGT TTGGGTTCGG GTTGTCCTAC ACAACCGTGG AGTACAGCGA GCTGGTGCTT
GACCGCACGG TACTTGGTGC GGGGGACACT GTCACCGCTC ACATCACCGT GACGAACACG
GGGCAGCGGC CCGCGGTGGA AACCGTGCAA GCGTACGTGT CTGACCTGGT GACCTCGGTG
TCGTGGGCGG ACAAAGAACT CAAAGCGTTT ACTCAGGTGG AGGTGCAACC TGGACAGAGC
GTGACCGCAA CCGTCCAGGT GCCCGTCGCG GACTGCACAA TTGTCGATGC GCGTGGCCGC
CGCGTTGTTG AGCCCGGTGA GTTTGAGCTG CTGGTAGGGC CCTCATCGAG GGACGAGGAC
CTGCACCGGG CGAAGTTCAT CGTGCAGTGA
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| Protein sequence | MTTPLPYRDP TLPIQQRVTD LLSRMSREEK VGQMMQLDAR DNLDHLINTV HVGSILHTSP
DALREAHTLV ERTPLGIPLL VGEDCIHGHS FFEGTTIFPT QLGMAASWNA PLIEQAARVT
AVEASATGIH WTFSPVLCIA RDLRWGRVNE TFGEDPHLIG ELASAMVRGY QGDGLTDHTA
ILATAKHFAA YSETQGGRDA SEADVSQRKM RSWFLPPFER VAREGCRTFM LGYQTTDGVP
ITINSWLLDD VLRGEWGYTG MLITDWDNVG RMVWEQQVMP DHTHAAAAAV KAGNDMVMTT
PQFFDGALRA LDQGLLTDAD VDAAVSRILT VKFELGLFEN PRRPNPERIA TALATPDHTA
INRDLTRRSL VLLANDGTLP LDATLEVSKK IAVIGPNAND HQYQLGDWAG NSGQAGWMPD
GHLTNQITTV YEGLRDIVPD TWTVTHARGA NIVDLVDDPA GTHFPDGQPR PRIAQPAPID
EALHNEALAA ANNADYIVAV VGDAIPLVGE GRSTATLNLL GGQEQLLNDL AATGKPLIVV
LLASKPLVLP PSALNANAII WAANPGMRGG QALAELITGA IEPAGRLPIS FARHVGQQPT
YYNQIRGQHG DRYADLTQDP QWAFGFGLSY TTVEYSELVL DRTVLGAGDT VTAHITVTNT
GQRPAVETVQ AYVSDLVTSV SWADKELKAF TQVEVQPGQS VTATVQVPVA DCTIVDARGR
RVVEPGEFEL LVGPSSRDED LHRAKFIVQ
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