Gene Jden_0181 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJden_0181 
Symbol 
ID8379376 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJonesia denitrificans DSM 20603 
KingdomBacteria 
Replicon accessionNC_013174 
Strand
Start bp193752 
End bp194918 
Gene Length1167 bp 
Protein Length388 aa 
Translation table11 
GC content60% 
IMG OID645002915 
Productaminotransferase class I and II 
Protein accessionYP_003160158 
Protein GI256831431 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0436] Aspartate/tyrosine/aromatic aminotransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGGTGT CTCGTCGTTC GCAGGTGCCG CCGTTTTCGG TCATGCAGAT TATTGCGCAG 
GCGCGGGAGC GTCATGCTGG CGGGCACCCG GTGATTAATT TGTGTGCGGG GGAGCCTGCT
GCTGGGGCGA GCGCTGTGGT ACGGCAGGAG GCGGCTCGGG TTCTTGAGTC TGGCGATTTG
GGGTATACCC AGTCGTTGGG TGTGCCGCAG CTTCGCGAGG CGTTGGCTGC CCATTATGCC
CGGTGGTACG GCGTTGAGGT GGATCCGCAG TGCGTTGCGA TCACAACGGG ATCTTCGGGC
GGGTTTGTGC TTGCTTTTCT TGCTGCTTTT GATGTGGGCG ATCGGGTGGC GGTAGCGCGG
CCTGGATATC CGGCGTATCG CAATATTTTG GTGTCGTTGG GTATTGAGGT GGTGGAGTTG
CCGTGTGGGT TGGGTACGCG GTTTCAGCCC ACTGTCGCCC AGTTGGATGA GGCGCACCGG
CGTTCTCCTC TTGCGGGTGT GGTGATTGCG TCTCCGGCGA ATCCGACGGG GACGATTATT
GATCCGCTGG AGTTTCAGGC AATAGTGGCG TGGTGTGCCT CGCATGGGGT GAGGTTGGTG
AGTGATGAGA TCTATCACGG GGTGGTGTTT GAGGAGTCTC AGCCGGTGGT GACGGCCGCT
GGGTTCCGGG ATATGGGTGC GATCACGGTG TCGTCGTTTT CGAAGTATTG GGCGATGACG
GGGTGGCGGA TCGGGTGGTT GGTGTTGCCA CAGGACATGG TGGCTACTGC TGATGCGCTG
GCGGGGAATG TGTCGTTGTG TCCGCCGGCG TTGTCGCAAT TTGCTGCGGT GGCTGCGTTG
TCGGAGCAGG GGTATGCGGC GGCGCAGGTG GATGTGGAGA TGTATCGGCT GTCGCGTGAG
GTGGTGCTTG ATGGGTGTGG GCGGTTGGGG TGGTCGCGGG TGGCTCCGGC TGATGGTGCG
TTCTATCTGT ATGCGGATGT GTCTGGTTCG GGGTTGGATT CGGTGACGTG GTGTGAACGG
TTGTTGGTGG AGGCGGATGT AGCGATGACG CCCGGGGTCG ATTTTGATTC TGAAGCGGGA
CGTGATTGGA TTCGTTTGAG TTTCGCTAAC CGACCTGAGG TGATGAGGGA AGCCCTTGAG
CGGGTGATTT CCTGGCAGAA CCGGTGA
 
Protein sequence
MKVSRRSQVP PFSVMQIIAQ ARERHAGGHP VINLCAGEPA AGASAVVRQE AARVLESGDL 
GYTQSLGVPQ LREALAAHYA RWYGVEVDPQ CVAITTGSSG GFVLAFLAAF DVGDRVAVAR
PGYPAYRNIL VSLGIEVVEL PCGLGTRFQP TVAQLDEAHR RSPLAGVVIA SPANPTGTII
DPLEFQAIVA WCASHGVRLV SDEIYHGVVF EESQPVVTAA GFRDMGAITV SSFSKYWAMT
GWRIGWLVLP QDMVATADAL AGNVSLCPPA LSQFAAVAAL SEQGYAAAQV DVEMYRLSRE
VVLDGCGRLG WSRVAPADGA FYLYADVSGS GLDSVTWCER LLVEADVAMT PGVDFDSEAG
RDWIRLSFAN RPEVMREALE RVISWQNR