Gene Jden_0179 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJden_0179 
Symbol 
ID8379374 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJonesia denitrificans DSM 20603 
KingdomBacteria 
Replicon accessionNC_013174 
Strand
Start bp192011 
End bp192538 
Gene Length528 bp 
Protein Length175 aa 
Translation table11 
GC content55% 
IMG OID645002913 
Productprotein tyrosine phosphatase 
Protein accessionYP_003160156 
Protein GI256831429 
COG category[T] Signal transduction mechanisms 
COG ID[COG0394] Protein-tyrosine-phosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTACCGGG TAATGATGGT GTGTACAGGC AATATTTGCA GGTCACCCAT GGCGCAGTTC 
GTTCTGGAGT CGAAGCTTGA GCGGGTTGGC CTTGCGCATA CGGTGGTTGT TGATTCGACG
GGAATCAGCG ATGAAGAAGC GGGGAACCCG ATTGATCATC GGGCGCGGCG CACTCTTGCT
GCGGCGGGTT ATGACAGTTC GAGGATTATT GAGCATCGTG CCCGGCAGTT GGAGGGTGAG
GATGTTGTGG GGAACGACCT CATTCTTGCG ATGACCACTG CGCATGCTCG TGCGATTCGT
CGGTTGGGTG ATATTTCTGG GGTTCCAGAA GCAACTGATC ATATTCGTAT GTTCCGGTCG
TTTGACCCGT TTGCCCCGGC TGCTGTGTCG TTTCACGATG AGTTTCTTCT TGATGTGGCC
GATCCCTGGT ACGGGGGGAT GAAAGACTTT CAGGTGTGTT TGGAACAGGT CGAAACAGCA
ACTGATGGGC TTGTGGAGTT CCTGATCCAA ACCGTGGGCA AGGGGTAG
 
Protein sequence
MYRVMMVCTG NICRSPMAQF VLESKLERVG LAHTVVVDST GISDEEAGNP IDHRARRTLA 
AAGYDSSRII EHRARQLEGE DVVGNDLILA MTTAHARAIR RLGDISGVPE ATDHIRMFRS
FDPFAPAAVS FHDEFLLDVA DPWYGGMKDF QVCLEQVETA TDGLVEFLIQ TVGKG