Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jden_0179 |
Symbol | |
ID | 8379374 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jonesia denitrificans DSM 20603 |
Kingdom | Bacteria |
Replicon accession | NC_013174 |
Strand | + |
Start bp | 192011 |
End bp | 192538 |
Gene Length | 528 bp |
Protein Length | 175 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 645002913 |
Product | protein tyrosine phosphatase |
Protein accession | YP_003160156 |
Protein GI | 256831429 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0394] Protein-tyrosine-phosphatase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTACCGGG TAATGATGGT GTGTACAGGC AATATTTGCA GGTCACCCAT GGCGCAGTTC GTTCTGGAGT CGAAGCTTGA GCGGGTTGGC CTTGCGCATA CGGTGGTTGT TGATTCGACG GGAATCAGCG ATGAAGAAGC GGGGAACCCG ATTGATCATC GGGCGCGGCG CACTCTTGCT GCGGCGGGTT ATGACAGTTC GAGGATTATT GAGCATCGTG CCCGGCAGTT GGAGGGTGAG GATGTTGTGG GGAACGACCT CATTCTTGCG ATGACCACTG CGCATGCTCG TGCGATTCGT CGGTTGGGTG ATATTTCTGG GGTTCCAGAA GCAACTGATC ATATTCGTAT GTTCCGGTCG TTTGACCCGT TTGCCCCGGC TGCTGTGTCG TTTCACGATG AGTTTCTTCT TGATGTGGCC GATCCCTGGT ACGGGGGGAT GAAAGACTTT CAGGTGTGTT TGGAACAGGT CGAAACAGCA ACTGATGGGC TTGTGGAGTT CCTGATCCAA ACCGTGGGCA AGGGGTAG
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Protein sequence | MYRVMMVCTG NICRSPMAQF VLESKLERVG LAHTVVVDST GISDEEAGNP IDHRARRTLA AAGYDSSRII EHRARQLEGE DVVGNDLILA MTTAHARAIR RLGDISGVPE ATDHIRMFRS FDPFAPAAVS FHDEFLLDVA DPWYGGMKDF QVCLEQVETA TDGLVEFLIQ TVGKG
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