Gene Jden_0176 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJden_0176 
Symbol 
ID8379371 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJonesia denitrificans DSM 20603 
KingdomBacteria 
Replicon accessionNC_013174 
Strand
Start bp188563 
End bp189279 
Gene Length717 bp 
Protein Length238 aa 
Translation table11 
GC content60% 
IMG OID645002909 
ProductFHA domain containing protein 
Protein accessionYP_003160153 
Protein GI256831426 
COG category[T] Signal transduction mechanisms 
COG ID[COG1716] FOG: FHA domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.74043 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTTTCC TCGACAAGTT CGAGCAGCGC GTTGAACGCG CAGTCAACAG CACCTTCTCA 
AAGGTGTTCC GATCTGACAT CAAACCCGTC GACCTAGCCA CTGCGCTGCG CCGCGAGGTC
GACGACCGCG CTGCAGTATT CGACCGTTCC CGCACAGTCG TCCCCAACGA CTTCACCATC
GAACTGTCCC AAGCAGACTT TGAACAAGTC GAAAGCTGGG GCGCTGAAAT GCTCGCAGAC
GAACTTGCCG TCAACGTCAC CGAGTACGCC GCCTCACAAC ACTATGCGTT CGTCGGGCCA
GTGGTCGTGA GCTTCGAACT CACCGAAGGC CTCGAAACCG GGCACTTCAC CGTCCGCTCC
TCCACCCTAC GAGGAAATGT CGCCCCCGGT CCCGCCGACC CACGCAGCTC ACGCCACCCC
CTCCTTGACA TCGACGGGCA ACGCTACCTC CTCACCGGTC CAGTCACCAT CATTGGCCGA
GGCTCAGAAG CAGACATTGT CGTCGATGAC CCCGGAGTGT CCCGGCGGCA CCTGGAAATT
TCGGTCACCC CACAAGGAGT GATCGCAACT GACCTCGGGT CCACTAACGG CCTCTACGTC
GAAGGCCACC AAGTACCCGC CGCCACCTTG CTCGATGGAA ACTCCTTAAC CATCGGTCGG
ACACGCATCA TGTTTTGGTC AGGTGTGACC GATGATTCCT CTCGTGGAGA CAGGTGA
 
Protein sequence
MSFLDKFEQR VERAVNSTFS KVFRSDIKPV DLATALRREV DDRAAVFDRS RTVVPNDFTI 
ELSQADFEQV ESWGAEMLAD ELAVNVTEYA ASQHYAFVGP VVVSFELTEG LETGHFTVRS
STLRGNVAPG PADPRSSRHP LLDIDGQRYL LTGPVTIIGR GSEADIVVDD PGVSRRHLEI
SVTPQGVIAT DLGSTNGLYV EGHQVPAATL LDGNSLTIGR TRIMFWSGVT DDSSRGDR