Gene Jden_0126 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJden_0126 
Symbol 
ID8379322 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJonesia denitrificans DSM 20603 
KingdomBacteria 
Replicon accessionNC_013174 
Strand
Start bp136859 
End bp137725 
Gene Length867 bp 
Protein Length288 aa 
Translation table11 
GC content62% 
IMG OID645002860 
ProductAldose 1-epimerase 
Protein accessionYP_003160104 
Protein GI256831377 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0676] Uncharacterized enzymes related to aldose 1-epimerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.255997 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGACAG CGCATGACAC AAGCCCCGAC AACGTCCTCA CCCCAGCCGG AACTTTCACC 
GTCCGCACCT GGGGTGGACA CGTCACCCAA TGGGACGCTC CCGGCTTTGG GCCACTGCTG
TACGTCTCCA GCGCAGCGAA CCACACCCCC GGCGTCGCTC TTCGAGGCGG GGTACCGGTC
TGCTTCCCAT GGTTCGCCAA AGGACCTGAC GGCAGTCACT CCCCCTCCCA CGGGTTCGCA
CGACTCAGCG AATGGGCACA CCTGTCCACC ACTGAAGACG CACAAGGAAA CCTCACCGTC
ACCCACGAAC TCACCCCCAC CCAAGCAGCC GCCGCAGACG GCATCCAACT TTTCCCCCAC
CCTTTCCACG CCACCCACAC CGCCGAATTC ACCGCAACCA CACTCACCAT CAGCTTGACC
GTCGTCAACA CCGGAGACAA CGACTTCACG TTCGAAGAAG CCCTCCACAC CTACCTTGCT
GTCTCCACCA TCACCGACGT CAGCGTCTTT GGACTCGACG GTGAGCCGTT CACCGAAGAC
GGCGCCGCTG GCACCCAAGA AGGACCACTC ACCTTCGGGG AGCGCATCGA CCGGATTTAC
ACCTCCATGC ACCCCGTGAC CCTCGCTGAC CCCGGAGCGA ACCGCACCAT CACCATCACA
AAAACCGGGT CACGCTCCAC GGTTGTGTGG AACCCAGGAC CGGATCTCGC CGCCACCATG
CCTGACATCG GTCACGGCGA ATGGGAGCGC TTTGTGTGCA TCGAATCAGG AAACATTGGG
GACAACGCCA TCACCGTCAA ACCCGGCCAG GGACACACCC TCACCGCAAA ATATGAGGTC
TCCCCGATCG AACCAATCGA GATGTGA
 
Protein sequence
MTTAHDTSPD NVLTPAGTFT VRTWGGHVTQ WDAPGFGPLL YVSSAANHTP GVALRGGVPV 
CFPWFAKGPD GSHSPSHGFA RLSEWAHLST TEDAQGNLTV THELTPTQAA AADGIQLFPH
PFHATHTAEF TATTLTISLT VVNTGDNDFT FEEALHTYLA VSTITDVSVF GLDGEPFTED
GAAGTQEGPL TFGERIDRIY TSMHPVTLAD PGANRTITIT KTGSRSTVVW NPGPDLAATM
PDIGHGEWER FVCIESGNIG DNAITVKPGQ GHTLTAKYEV SPIEPIEM