Gene Jden_0121 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJden_0121 
Symbol 
ID8379317 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJonesia denitrificans DSM 20603 
KingdomBacteria 
Replicon accessionNC_013174 
Strand
Start bp133276 
End bp134379 
Gene Length1104 bp 
Protein Length367 aa 
Translation table11 
GC content63% 
IMG OID645002855 
ProductNADH:flavin oxidoreductase/NADH oxidase 
Protein accessionYP_003160099 
Protein GI256831372 
COG category[C] Energy production and conversion 
COG ID[COG1902] NADH:flavin oxidoreductases, Old Yellow Enzyme family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.186294 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCACAA CACTTTTCAC CCCATACACA ATCCGCCAGC ACACCATTGC CAACCGTTTG 
TGGGTTGCGC CCATGTGCCA ATACTCTGCC GACGACAACG GGATGCCCAC CGCCTGGCAC
CAGGTCCACT ACGGCCAATT CGCTACCGGC GGGGCCGGCC TCATCATGGT CGAAGCAACC
GCTGTCACCC CTGAGGGGCG CATCACCCCC AGCGACCTCG GCATCTGGGA CGACGCGCAC
ATCACCGCAT TCACACCCAT CACCCAGTTC CTCACCGACC ACGGCGCCAC CCCTGCGATC
CAACTGGCCC ACGCCGGACG CAAAGCCTCC ACGTGGCCCC CCACCACAGG TAACAGCGGA
ACCATCCCAC CCACCCAAGG TGGCTGGGAA ACACTCGCCC CCTCAGCACT CCCGTTCGGC
AGCGAATCAG GGGTACCCGA AGCTGACCAG TACGCGACCC CACGGGCCAT GACAGAAGAC
GACATCACCA GCGTCATTGC TAACTTCGTG GCCGCCGCAA CCCGTGCGAT CGCTGCCGGG
TTTCAGGTCC TTGAAGTCCA CGCAGCACAC GGCTACCTGC TCCACGAATT CCTGTCCCCC
CTCACCAACA CCCGCACCGA CCAGTGGGGT GGAGACATCA CTAACCGGTC ACGCCTCGCC
GTGAACATTG TCGCGGCCAT CCGGGAACGC CACCCTGAGG TCCCCCTTTT CGTGCGCATC
TCCGCAACTG ACTGGGTGGA CGGCGGTTAC ACACTTGACG ATGCGACCAT CACCTCCCAG
CTCCTGCGTG ACGCTGGAGC TGACCTCATT GACGTGTCCA CCGGAGGAAA CGTCGCACGG
GCACCGATCC CCGCAGCCCC CGGCTACCAA ATCCCCCATG CAGAACACAT CGCCCGCAAC
GCCAACATTG CTGTCAGCGG CGTGGGAATG ATTACTGACC CTCACCAAGC TGACAGCTAC
ATTCGCGAAG GACGAGTCGA CGCGATCATG GTTGCCCGCC ACATGATGCG TGACCCCCAC
TTCGCACTAC GTGCCGCTGA CACCCTGGGA CAAGACGTGC ACTGGCCCGC ACAATACAGT
CGCGCGCAAG GGTTCCCCGC CTAG
 
Protein sequence
MTTTLFTPYT IRQHTIANRL WVAPMCQYSA DDNGMPTAWH QVHYGQFATG GAGLIMVEAT 
AVTPEGRITP SDLGIWDDAH ITAFTPITQF LTDHGATPAI QLAHAGRKAS TWPPTTGNSG
TIPPTQGGWE TLAPSALPFG SESGVPEADQ YATPRAMTED DITSVIANFV AAATRAIAAG
FQVLEVHAAH GYLLHEFLSP LTNTRTDQWG GDITNRSRLA VNIVAAIRER HPEVPLFVRI
SATDWVDGGY TLDDATITSQ LLRDAGADLI DVSTGGNVAR APIPAAPGYQ IPHAEHIARN
ANIAVSGVGM ITDPHQADSY IREGRVDAIM VARHMMRDPH FALRAADTLG QDVHWPAQYS
RAQGFPA