Gene Jden_0120 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJden_0120 
Symbol 
ID8379316 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJonesia denitrificans DSM 20603 
KingdomBacteria 
Replicon accessionNC_013174 
Strand
Start bp132485 
End bp133189 
Gene Length705 bp 
Protein Length234 aa 
Translation table11 
GC content65% 
IMG OID645002854 
Productglutamine amidotransferase class-I 
Protein accessionYP_003160098 
Protein GI256831371 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0518] GMP synthase - Glutamine amidotransferase domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.173419 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGCAC ACGCCATCAT CCTTCAGCAC GTCCTCGCGG AAGACGCCGG GCTCCTCACC 
CCCATCCTCC ACGACTACGG GTACACGGTC ACCATGATCG AAACCCCCAT CCACTCAGTG
ACCACCACCC AGGCACTCGA CGCAGACCTG CTCATTGCGC TTGGCGGCCC CATCGGGGTC
GAAGACCGCG ATCTCCACCC CTACCTCCAC GACGAACTTG ACGCCCTTGG CACCCGCATG
GCTGATAACG CCCCCACCCT CGGTATCTGC TTAGGAGCGC AACTCATGGC CCACGCTCTT
GGAGCTGACG TCACCTCCAC TGGCCGCGCC GAGATCGGGT ATGGGCCACT CACCCTCACC
CCCGAAGGAC ACCACTCACC CCTCGCCGCC CTCGGCGACA CACCCGTCCT CCACTGGCAC
GGCGACCAGT TCGCCATCCC CACTGGAGCC ACCCGCCTCG CCGAAACCCC CGGCTACCCC
AACCAAGCAT TCGCCCACGG ACCCAACATC CTCGCACTCC AATTCCACCT CGAAGTCGAC
CCCACCACCA TTGAACGGTG GATCATCTCC AACGCCAACG AACTAGCCCT CCACTCCATC
CACCCCACCA CCCTGCGCCG CGACGCCGCC AGCCACGGTG CGGCGCTCGC AACTGCCGGA
ACCCAGGTGT TCACCACCTG GTTGGACGGT TTAGTGACCC GGTAA
 
Protein sequence
MTAHAIILQH VLAEDAGLLT PILHDYGYTV TMIETPIHSV TTTQALDADL LIALGGPIGV 
EDRDLHPYLH DELDALGTRM ADNAPTLGIC LGAQLMAHAL GADVTSTGRA EIGYGPLTLT
PEGHHSPLAA LGDTPVLHWH GDQFAIPTGA TRLAETPGYP NQAFAHGPNI LALQFHLEVD
PTTIERWIIS NANELALHSI HPTTLRRDAA SHGAALATAG TQVFTTWLDG LVTR