Gene Jden_0119 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJden_0119 
Symbol 
ID8379315 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJonesia denitrificans DSM 20603 
KingdomBacteria 
Replicon accessionNC_013174 
Strand
Start bp131416 
End bp132462 
Gene Length1047 bp 
Protein Length348 aa 
Translation table11 
GC content60% 
IMG OID645002853 
Productprotein of unknown function DUF218 
Protein accessionYP_003160097 
Protein GI256831370 
COG category[S] Function unknown 
COG ID[COG1434] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.422825 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.192252 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATATCG TTTTGACGGT CCTTTTCGTC GCCGCTGCAA CCCACGGGTT TGTGACCCAA 
CCGCGTCGTG TACGCAACAT GGTGTACGTG GGGTTCGCGG TGATGTTTGC GGTTCTGGCT
GTGACTGCCC AGGGTGGGAA CAACACGATC GTTGGGGTGG GGATCGCCCT GTTCGGGGTG
GGGTTTTTGT TGTCCATCCC GGTGTTGGCG ATCACGTTCC TTGCGTGGGG TGTCAGCGGG
TTCCGCCGTG ATGTGCCACG TTTCGCGGTG GTGGGGATTC TTGCGGGGAT CGCCCTGATG
TGTGCACCGG TGGTGCCGTT CGCCATGATT TCGCAGCACT CTCCGGGACG GATTTGGGCG
AGCTTGTGGC TGGTCATGAT TATTGGGTAT TTGGGGTTCG CGTTCACCTG CTACCTTGCT
TACACGTTCT TGTATGCGGC TGTGCCTGAG CGGTTCATCT CGTCTTATAT TGTGGTGTTA
GGGTCCGAGC TGGACGGCGA CCAGGTCACC CCGGTGCTTG CGTCCCGCCT CAACTATGCG
ATCACCCTGT ACGCGAACTA TTCGGCGTTC CATGGTGAAA CTGCCATTGT GGTCAGTGGT
GGGACACCTG AACCGCCTAC CGATGCGCCC GCCCAGTCCC CTGAGTCGGC ACCGGTGGCA
CCGGGGCCGG CTTCTGTCGC TGAGGCGCAC GCTATGCGTG ACTATCTCAC GAACCACGGG
ATTCCAGCTC GTGACATTGT TGTTGAAGAC ACGGCGCTCA CCACTGAAGA TAACCTCATC
CAATCACGGC TACTCATCCC CGAACCAGAC GCACCTCTTG CTGTTGTGAC AAGCAACTAC
CACGTGTACC GCACCACCAC CCTCGCCCGC CAGCTGGGGG TCCGTGCCCA CGTGTATGGT
GCGCCAACCC CACGCGGGTT CCTTGCCGGT TCGCTCCTGC GCGAATTCGC GGCAATCCTC
ACCCACACCG TTCTCCCCAA CGTCCTCATC ATCATTGGCC TCACCGGGCT TTGCCTCATT
GGCCTGCGCT CCACCATCGG CGGGTAA
 
Protein sequence
MDIVLTVLFV AAATHGFVTQ PRRVRNMVYV GFAVMFAVLA VTAQGGNNTI VGVGIALFGV 
GFLLSIPVLA ITFLAWGVSG FRRDVPRFAV VGILAGIALM CAPVVPFAMI SQHSPGRIWA
SLWLVMIIGY LGFAFTCYLA YTFLYAAVPE RFISSYIVVL GSELDGDQVT PVLASRLNYA
ITLYANYSAF HGETAIVVSG GTPEPPTDAP AQSPESAPVA PGPASVAEAH AMRDYLTNHG
IPARDIVVED TALTTEDNLI QSRLLIPEPD APLAVVTSNY HVYRTTTLAR QLGVRAHVYG
APTPRGFLAG SLLREFAAIL THTVLPNVLI IIGLTGLCLI GLRSTIGG