| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_0117 |
|---|
| Symbol | |
|---|
| ID | 8379313 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Jonesia denitrificans DSM 20603 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013174 |
|---|
| Strand | + |
|---|
| Start bp | 129594 |
|---|
| End bp | 130742 |
|---|
| Gene Length | 1149 bp |
|---|
| Protein Length | 382 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 645002851 |
|---|
| Product | histidine kinase dimerisation and phosphoacceptor region |
|---|
| Protein accession | YP_003160095 |
|---|
| Protein GI | 256831368 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG4585] Signal transduction histidine kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.0493339 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.135679 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGTGCGGG AGCGTCGTGA GTTGGCGCTC CCCGCTATTT TTTTGGTGTT CCTCATCCCG
CAGGTAGTCA ATGTGTGGGC ATCGCATGAT GCGTGGTGGG TGCGCGTGGT GGGTGTGGGG
TTGGTTATTG GTTTTGCGGT TGTGTACATG TGGGGTTTTT ACCGCTTCCC GATGCCGGTT
TTTGGTCCTC CTGAGCGTTC CGTGTGGTGG GTGTTTGTGG TGTTGACGGC GCTGACGGGT
GGTCTCAGTG TGTTGGTGGG GCCGGTTGCG TTGGCGACGC TTCCGTTTCA TGTGGCGGCT
GCGTGTTATT TGTTGCGACG GCCGGTTGCT GTTGTTGTGG CGATGTTTTA TGTCCTTGGG
GTTGTTACGG TGTTGCGCGG TCTGGGGGTG TGGGATGAGT TGTCGTTTAT CCCGTGGCTG
GTGGCGGGTG TGTTTGCCGG TAATTTTGTG CTTTCGTCAG TGTTTATTGG TGATGTGCGC
ACGATGCAGG TGGAGCAGGA GTTGGCTGTG ACTCGGGAGC GTGAGCGCCT CGCCCGTGAT
GTTCATGATT CGTTGGGTCA CACGTTGACG GTGGTGTCGA TTAAGGCTGA GTTGGCGTCA
CGGTTGGTGT CGTCGCAGCC GGAGCGGGCG GCGCGTGAGC TTGTTGAGGT GCGTGATCAT
GTTCGTGATG CGCTTTCTCA GGTGCGTGAT GTGGTGACGG GGTTGACTCA TCACAGTATT
GCTGACCATG TTTCTGCGTT GAGGTATTCG ATGGATGGCG CGGGTCTTGA TGTTGAGGTG
ACGGGGTCTA TGCAGGGTGT TCCGCAGCGT GTGGTGGAGT CGGTGGGGTG GATTGTGCGG
GAGGCGGGGA CGAATGTGTT GCGTCATGCG CGCGCTTCGC GTTGTACGAT CGCGGTGACT
TCTCGCGACT TGACTATCAC TGACAATGGG GTGGGGATTC CCGCCCACTT CACGGGTGTG
TTGACCTCTC CGGTGGCTGC CGGGTCGGAC ACCATGTCGG CGAACATGCG GGGACCAGGC
CCGCAGTTGC CGGGTCGGCA TGGCATCACA AGTATGACGC AGCGGGCCGC TGATGCTGGT
TTGACGTTGA CGATTACTGT TCCCGCCGGT GGCGGGACGA CCCTGACTGT TGGGTGGGAC
ATCCCATGA
|
|---|
| Protein sequence | MVRERRELAL PAIFLVFLIP QVVNVWASHD AWWVRVVGVG LVIGFAVVYM WGFYRFPMPV
FGPPERSVWW VFVVLTALTG GLSVLVGPVA LATLPFHVAA ACYLLRRPVA VVVAMFYVLG
VVTVLRGLGV WDELSFIPWL VAGVFAGNFV LSSVFIGDVR TMQVEQELAV TRERERLARD
VHDSLGHTLT VVSIKAELAS RLVSSQPERA ARELVEVRDH VRDALSQVRD VVTGLTHHSI
ADHVSALRYS MDGAGLDVEV TGSMQGVPQR VVESVGWIVR EAGTNVLRHA RASRCTIAVT
SRDLTITDNG VGIPAHFTGV LTSPVAAGSD TMSANMRGPG PQLPGRHGIT SMTQRAADAG
LTLTITVPAG GGTTLTVGWD IP
|
|---|
| |