Gene Jden_0116 details

Gene Information

• Locus tag: Jden_0116
• ID: 8379312
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Jonesia denitrificans DSM 20603
• Kingdom: Bacteria
• Replicon accession: NC_013174
• Strand: +
• Start bp: 128839
• End bp: 129582
• Gene Length: 744 bp
• Protein Length: 247 aa
• Translation table: 11
• GC content: 55%
• IMG OID: 645002850
• Product: ABC-2 type transporter
• Protein accession: YP_003160094
• Protein GI: 256831367

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 0.0506987
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 18
• Fosmid unclonability p-value: 0.184799
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGACGTTGT TTCGGGTTGA TGTGGTCCGC CAGTTGCGGG ACGTGGGGAA CATTATTTTT 
GTGTTGGTGA TGCCTACGTT AATGTTTGTG ATTTTTGGTG CGGCGCAAAG TTATGGGTCG 
GAACCTGCGT GGAATGCGAA TGTCAGTTTT TACATTATGG TGTCGATGGC GTGTTATGGG 
GCGGCGTTGT CGGCGGTGAA TATTGCGGCG ACTGCTGCGT TGGAGCAGAT GCAGGGGTGG 
GGTCGTCAGT TGGGGTTGAC GCCGGCGTCG GGGGGAACGT TAGTGGGGAC GAAGGTGATG 
GTGGCGTTGA CGTTCACTGC GTGTGCTGTG GGTTTGGTGT TTGTGACGGG TGTTGTGTCT 
GGTGCCAGGG CGGACAGTGT GTGGGTTTGG GTGTGGTCGT ATGTTGTTAT TCTTGCGGGT 
TCTTCGTTAT TTGCGTTGAT GGGTTTTGCT ATTGCAGTGA ATTTCCGGTC TGATTCTGCC 
AGTGGGTTGG CATCTGGTGC GATTGTGTTG TTGAGCTTTT TGGGGAATGT GTTTACCCCG 
TTGTCGGGGA CGATGTTGAT GATCGCGAAG TTCACTCCGT TGTATGGGTT TGTGTCGTTG 
GCTCGGTGGC CGCAGCTTGA GGGGCACATT CTTGATGGTG GGCGTGATTC GTTGTGGGTG 
ATTGTGGCGA ACGTGTGTGG GTGGGCGTTG GTGTGCGCCA CGTTTGCTGT GGTGGGTGCG 
CGTCGTGGGC GGCGCCGCCA GTGA 

 

Protein sequence

MTLFRVDVVR QLRDVGNIIF VLVMPTLMFV IFGAAQSYGS EPAWNANVSF YIMVSMACYG 
AALSAVNIAA TAALEQMQGW GRQLGLTPAS GGTLVGTKVM VALTFTACAV GLVFVTGVVS 
GARADSVWVW VWSYVVILAG SSLFALMGFA IAVNFRSDSA SGLASGAIVL LSFLGNVFTP 
LSGTMLMIAK FTPLYGFVSL ARWPQLEGHI LDGGRDSLWV IVANVCGWAL VCATFAVVGA 
RRGRRRQ