| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_0104 |
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| Symbol | |
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| ID | 8379301 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jonesia denitrificans DSM 20603 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013174 |
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| Strand | + |
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| Start bp | 115545 |
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| End bp | 117299 |
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| Gene Length | 1755 bp |
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| Protein Length | 584 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 645002839 |
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| Product | Beta-galactosidase |
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| Protein accession | YP_003160083 |
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| Protein GI | 256831356 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1874] Beta-galactosidase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.114999 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCAGTTT TTGCGATCGG TGAGCGTGAC TTCACCCTCG ACGGAGAACC ATTCCAGATC
ATTTCTGGGG CGATCCACTA TTTTCGGGTC CACCCTGACT CGTGGCGGGA CCGGATCCGC
AAAGCACGCC TCATGGGGCT CAACACGATT GAAACCTACG TTGCCTGGAA CTTCCATGCA
CCCAGTCGGG ACGAGTTCCA TACAGATGGG GCGCGCGACC TTGGTCGCTT CTTGGACATC
ATCCAGGAGG AGGGCTTGCG GGCTATTGTT CGACCTGGCC CCTATATTTG CGCTGAATGG
GATAACGGCG GCTTGCCCAC GTGGCTCACC GCCACCCCAG ATATCGTCGT GCGCAGTTCA
GACCCGACCT ACCTTACAGA GGTAGAACGG TATCTTGAGC ACCTTGCCCC CATTGTGGAG
CCCCGCCAGA TCAACCATGG AGGCCCTATC ATCCTCATGC AGGTGGAAAA CGAGTACGGC
GCATACGGCA ATGACCGCGC CTACCTGACA CACCTGACGA ACGTGTACCG GAACCTCGGC
TTTGTGGTGC CACTGACCAC AGTGGACCAA CCTATGGATG ACATGCTTGC GCACGGGACG
CTGCCAGACC TCCACACAAC TGGCTCATTT GGTTCGCGCA TCGACGAACG GTTGGCTACC
CTACGAGAAC ACCAAACCAC AGGGCCGCTC ATGTGCTCGG AGTTTTGGAT TGGCTGGTTT
GACCACTGGG GCGCCCACCA CCACACTACT GATGTTGCTG ATGCGGCAAA CGCGCTGGAC
CGCCTGCTAG GTGCAGGCGC ATCGGTCAAT ATTTACATGT TCCATGGCGG CACAAACTTT
GGGTTCACCA ACGGGGCGAA TGATAAAGGC GTCTATCAGC CGTTGGTGAC CAGCTACGAC
TATGACGCCC CCCTTGCCGA AGATGGTTAC CCGACCGAGA AGTACTGGGC TTTTCGCGAG
GTCATCGCGC GGTATGCACC TGTTCCCGCT GAGGTGCCTG CGGAGCGTCC CTTGGTTGCG
GAACGGTCCG TGCCGTTGAC GCATCGGGTG GGCTGGTTGG ACGTTCCGTT GGATGTGGAT
GAGGCAGTCA CGTGTGACAG TCCGGCCACG TTTGATGGCC TCAACGTGTC GGGTCCGTTT
GTGGTGTATG AGCGCGACAT CGCTGTTGAG GGTGACGCGG TCCTGCGGTT TAACCAGGTG
CGGGACATCG CCTACGTGTT TGTGGACACA ACCTTTGTGG GGGTAGCGTA CCGCGACCAC
CATGATGCTT TTATTCCCTT GCCTACCGAT GCGCGTGGAA CGTTACGTGT GTTGGTGGAG
GATCAGGGAC GGGTCAACTA TGGGCCACGT TTGGGCGAAT GGAAAGGGAT GGGGACTGTT
GAACTGCAAG GCCACATTCT CACAGGGTGG CGGGTGACTC CTTGTGACCC GTTATTGGCG
GAGCGGGCCG CATGGCACGA GATCAGCACA CTGAGCGACG CGATCCCTGG GCCAGTGATG
TTACGTGGTG ACGTGCATGT GGATGTTCCG GAGAACCTTT ATCTTGACAC CTCGGGGTGG
GGTAAGGGGG CTGTGTGGGT TAATGGCTTC AATGTGGGTC GGTATTGGTC GCGTGGCCCG
CAACACACGT TGTTTGTTCC TGCTGAACTG TTGCGCCCCG GGGTGAACTC AATCATGGTC
TTCGAACTTT TTGGGGTGGC GAGTGCTCAT GTGGTGTGTG CTGCGGGCCC GGACTTGGGG
CACACGGAGT TTTAG
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| Protein sequence | MSVFAIGERD FTLDGEPFQI ISGAIHYFRV HPDSWRDRIR KARLMGLNTI ETYVAWNFHA
PSRDEFHTDG ARDLGRFLDI IQEEGLRAIV RPGPYICAEW DNGGLPTWLT ATPDIVVRSS
DPTYLTEVER YLEHLAPIVE PRQINHGGPI ILMQVENEYG AYGNDRAYLT HLTNVYRNLG
FVVPLTTVDQ PMDDMLAHGT LPDLHTTGSF GSRIDERLAT LREHQTTGPL MCSEFWIGWF
DHWGAHHHTT DVADAANALD RLLGAGASVN IYMFHGGTNF GFTNGANDKG VYQPLVTSYD
YDAPLAEDGY PTEKYWAFRE VIARYAPVPA EVPAERPLVA ERSVPLTHRV GWLDVPLDVD
EAVTCDSPAT FDGLNVSGPF VVYERDIAVE GDAVLRFNQV RDIAYVFVDT TFVGVAYRDH
HDAFIPLPTD ARGTLRVLVE DQGRVNYGPR LGEWKGMGTV ELQGHILTGW RVTPCDPLLA
ERAAWHEIST LSDAIPGPVM LRGDVHVDVP ENLYLDTSGW GKGAVWVNGF NVGRYWSRGP
QHTLFVPAEL LRPGVNSIMV FELFGVASAH VVCAAGPDLG HTEF
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