| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_0088 |
|---|
| Symbol | |
|---|
| ID | 8379285 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Jonesia denitrificans DSM 20603 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013174 |
|---|
| Strand | + |
|---|
| Start bp | 97823 |
|---|
| End bp | 98506 |
|---|
| Gene Length | 684 bp |
|---|
| Protein Length | 227 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 645002823 |
|---|
| Product | YKOF domain protein |
|---|
| Protein accession | YP_003160067 |
|---|
| Protein GI | 256831340 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.0259806 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 0.736746 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGATCA CGCACTCAGA AACTGACGTG TTCACACAGG ACCCACTCCG GTTTGGGGTG
GGGGCCCGTG TCACGATTTC CGTGATGACG GACAACTACG TTGAGGTGAT CCTCAACGCC
CTCGATGCGG TTGACCCTGG TGGACTGTCC CTGGCTACTG GGGATGTATC CACGTGGGTG
GGAGGGCATG AACATGATGT CCTGGCGTAT CTGACTGCAG TCACACGGGA GATTGCTGCC
ACTGGGCATC ACGCATCGGT CAGCATCCAC TTGTCGCGCG GGTGCCCTGG TGAGGTGGCG
TGTGCGCTGC CTGGTGGGGC TGGTCCGCGT GTTGTGACCG CGCCTCAAGG GGAAGTCACC
GGGTTGTGGG CGGCTGCCGA GTGGGCGTTG TACCCGCTTG GTACAACGAC GAGCACGGCC
ACAGATGATG CTGGGCGCGC GGTGGAGCCT GAGCACATGA CTGCGATTTA TGCGGCCATT
GAATCGACCC GTGCCGCTGG ACTGTACCGG GGGTCGGAAC ACTACGTCAC GCGTCTTGAA
GGTGACCTCG GGCTGATACT TGGGCACGTC ACAGCGGCGT GGGTGGCGGT GGGTGCAAGT
GTCCAACACG TGACCAGTCA CCTGACGTTG TCCCTCAACA GCCCCAGCCA CGCATCGGCC
ACTTCCTTGG GAGACCACTC ATGA
|
|---|
| Protein sequence | MTITHSETDV FTQDPLRFGV GARVTISVMT DNYVEVILNA LDAVDPGGLS LATGDVSTWV
GGHEHDVLAY LTAVTREIAA TGHHASVSIH LSRGCPGEVA CALPGGAGPR VVTAPQGEVT
GLWAAAEWAL YPLGTTTSTA TDDAGRAVEP EHMTAIYAAI ESTRAAGLYR GSEHYVTRLE
GDLGLILGHV TAAWVAVGAS VQHVTSHLTL SLNSPSHASA TSLGDHS
|
|---|
| |