| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_0086 |
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| Symbol | |
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| ID | 8379283 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jonesia denitrificans DSM 20603 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013174 |
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| Strand | - |
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| Start bp | 94875 |
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| End bp | 96443 |
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| Gene Length | 1569 bp |
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| Protein Length | 522 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 645002821 |
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| Product | MATE efflux family protein |
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| Protein accession | YP_003160065 |
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| Protein GI | 256831338 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0534] Na+-driven multidrug efflux pump |
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| TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCACACA AAACCCTGAC CGTTGGAACC CCCTGGCGCG TCATCCTTTT CTTCACTGTT
CCCCTACTCA TCGGGAACTT TGTGCAACAG CTGTACCACG TCATCGACGC CATGGTTGTG
GGCAACGCAC TCGGCGTGAA CTCCCTCGCC GCTGTCGGAG CTACCGGCTC ACTACTCTTC
CTCCTCCTTG GGTTCGCCTG GGGAATGACC ACCGGGTTCG CAATCCCCAC CGCCCAAGCC
TTCGGAGCCG GCGATGCCAC CGGCGTTCGC CGCTCCGTGG CCGCCGGGGT TCTCCTCTCC
GCCGCGGTGT CCCTCCTGCT CACCATCGTG GCACCCCTCA TCGCACGCCC CATGCTCATC
GCGCTGCAAA CCCCCGCCGA ACTCCTCGAC GAAGCCACCA CCTTCGCCGT CATCTCCTTC
CTCGGCGCCG GTGCCACCAT GTTCTTCAAC CTGCTCTCCG CGATCATCCG CGCCATCGGC
GACTCCCGAA CACCCCTGGT GTTCCTCATC ATCGCGTGCG GCATCAACAT CGTCCTCGTC
CTCGCGTTCG TTGCCTGGCT CGGCTACGGC GTCGGCGGCG CAGCACTGGC GACCGTCATC
TCCCAAATCA TCTCCGTCCT GCTGTGTCTC ATCTACCTGC GCCGTTCACT GCCCGCACTC
CACGTCCACC GCGACGACTG GCGGGTCACC CGCACCGAAC TCGCCCACCA CATGCGCCTG
GGCCTGCCCA TGGGTTTCCA GTCCTCCATC ATCGCGATCG GCACCCTCGC CATCCAAGTG
CGCCTCAACA CCCTCGGCTC CGACGCGGTC GCCGCCTACA CGACAGCCAC CCGCGTCGAC
GGACTCGCCG TTGCCCTGTT CGTCTCCCTC GGCATCGGAG TGTCCACCTA CACCGCACAA
AACTACGGCG CCGGGCACCA CGAACGCATC CGTCAAGGAG TACGACAAGC GCTCTGGCTC
TCCATCGCCG GATCCGCCAT CCTCGCCACC GTCCTCATCG CCGCAGGTGT CCCCATCATC
CGACTTTTCG TCGGTGAAGG TGCCACCACA GTGGTCGACA TGGCCCACTG GTTCCTCATC
ACCAACGGAT CCCTCTACGC CATGCTCGGC ATCCTCCTCG TCCTGCGCGG AGCGCTCCAA
GGACTCGGCT ACACCTTCAT CCCCACCATG ACCGGAGTCG TTGAACTCGT CATGCGAGTC
TCCGCAGCAC TGGTCCTTGG GGCACTCTTC GGATTCACCG GTCTCGTCTG GGGTAACCCC
ATGGCCTGGT TCGGAGCCAT GGTCCTACTC ATCCCCGCCT GGAAAGCTGC CAAAAAACGG
CTCGCAGCAG ACACGACCAC CCAGCCCGCG CATCGGCAGT CCACCAGTGA CAACACCTGT
GAAGACCTCA GCCACGACCC GGCGATGAGC ACCGAAGGTG GACTCGCCCC CGTCGTACTC
GGCATGTCCC AATCAGAACG AAACACCGCC GTCACCATCA TCGCGCCCGA CACCACCGAA
CCACACCCAC ACAATGACAC CCAGCGTCAG GCAGCACACA CCAACGACCA CGCCACCCGG
CACTGCTAA
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| Protein sequence | MPHKTLTVGT PWRVILFFTV PLLIGNFVQQ LYHVIDAMVV GNALGVNSLA AVGATGSLLF
LLLGFAWGMT TGFAIPTAQA FGAGDATGVR RSVAAGVLLS AAVSLLLTIV APLIARPMLI
ALQTPAELLD EATTFAVISF LGAGATMFFN LLSAIIRAIG DSRTPLVFLI IACGINIVLV
LAFVAWLGYG VGGAALATVI SQIISVLLCL IYLRRSLPAL HVHRDDWRVT RTELAHHMRL
GLPMGFQSSI IAIGTLAIQV RLNTLGSDAV AAYTTATRVD GLAVALFVSL GIGVSTYTAQ
NYGAGHHERI RQGVRQALWL SIAGSAILAT VLIAAGVPII RLFVGEGATT VVDMAHWFLI
TNGSLYAMLG ILLVLRGALQ GLGYTFIPTM TGVVELVMRV SAALVLGALF GFTGLVWGNP
MAWFGAMVLL IPAWKAAKKR LAADTTTQPA HRQSTSDNTC EDLSHDPAMS TEGGLAPVVL
GMSQSERNTA VTIIAPDTTE PHPHNDTQRQ AAHTNDHATR HC
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