Gene Jden_0050 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJden_0050 
Symbol 
ID8381716 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJonesia denitrificans DSM 20603 
KingdomBacteria 
Replicon accessionNC_013174 
Strand
Start bp58074 
End bp58712 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content57% 
IMG OID645002786 
Productprotein of unknown function DUF161 
Protein accessionYP_003160030 
Protein GI256831303 
COG category[S] Function unknown 
COG ID[COG1284] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.404169 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.436132 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTGCAC CACCACCATC CACCGCACCA TCGCTCACCC CTGCCCGGCA CAAGCACACG 
GTCATTGAGG ACATTTTTGG GCTTGTCGCA GGCGTTGTGG TGACAAGCTT TGCGCTGTTT
TTGTTGCGCT CCACGGGTGC GGTCACTGGC GGGATCGCCG GGTTGGCGCT CGCGGTGGAG
TACTGGAGCG GTGTTTCAGT GTCGTTGCTG GTTGTCGTGT TGAATGTGCC GTTTTTTGCG
GTGGCGCTGT GGCAGAAGGG CGTGCGGTTT ACGGTGCGCA CGTTGCTTGC TGTGGGTGGG
CTAGCGGTGA CGACCCAGTT CATTGGTCAC GTGTTCACGA TTGATTCGAT CAACCCTGTG
TTTGGTACGT TGACGGGAAA TTTGCTTGCT GGGTTGGGGA TGCTTATGTT GTTTCGCCAC
CAGGCGAGTT TGGGCGGGGT GTCTATTACG GGGTTGATCA TCCAGGAGCG CACCGGGTTT
AAGGCTGGGT ATACGCAGCT GATTTTCGAT GCGTGTGTTG TGGCGATCTC GTTTGTCACG
TTGGCGCCGT CGATGGTGGC GTTGTCGATC CTTGGGGCGG CGGTGTTGAA CGTGGTTATC
GTGTTGAATC ACCGCCCTGA TAGGTACTTG GGTTATTAG
 
Protein sequence
MPAPPPSTAP SLTPARHKHT VIEDIFGLVA GVVVTSFALF LLRSTGAVTG GIAGLALAVE 
YWSGVSVSLL VVVLNVPFFA VALWQKGVRF TVRTLLAVGG LAVTTQFIGH VFTIDSINPV
FGTLTGNLLA GLGMLMLFRH QASLGGVSIT GLIIQERTGF KAGYTQLIFD ACVVAISFVT
LAPSMVALSI LGAAVLNVVI VLNHRPDRYL GY