Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jden_0047 |
Symbol | |
ID | 8379246 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jonesia denitrificans DSM 20603 |
Kingdom | Bacteria |
Replicon accession | NC_013174 |
Strand | - |
Start bp | 56064 |
End bp | 57224 |
Gene Length | 1161 bp |
Protein Length | 386 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 645002784 |
Product | Radical SAM domain protein |
Protein accession | YP_003160028 |
Protein GI | 256831301 |
COG category | [R] General function prediction only |
COG ID | [COG0535] Predicted Fe-S oxidoreductases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.834961 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.32606 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCGGTTG TTGATGAGCA CCGTTCAGTG CGTCGCTTGC ACCACGATGC GGGTGACCGC CCGATGATCA CAATTTGGGA GGTCACACGT GCGTGTGCGC TGGTGTGCCA ACACTGTCGG GCCGACGCCC AGCACCGTCG AAACCCGCGC GAGCTGACCA CGGAACAAGG CAAAGCGCTC CTGGATAACA TTGCCTCTTT TGGGAAACCG TTTCCCATCG TCGTGATGAC AGGGGGCGAC CCCTTTGAGC GTGACGATCT TGCTGAACTC GTCGCCCACG GGCACGCGCA AGGCCTCCAC ATGGCGTTAT CCCCCTCAGT GACGCCCAAG ATGACACCGC AACGGTTACG GGAACTGCGT GCGGCTGGCG CATCGGCTAT GTCGTTGTCA TTGGACGGGT GCTGCGCGGA CACACACGAC AGCTTCCGTG GGGTTCCTGG GGTGTTCGAT CGGACGCTGG ACGCGGCAGC GTGGGTGCGG GAGGCCGGAT TCCGCCTGCA AGTGAACTCC ACCGTCACCC GCAAAACCGT GCACGAACTC CCGCGCCTCC TGGAGATGAT GGTCGCCATG CAGGCATCCC TGTGGAGCGT GTTTTTCCTT GTTCCCACTG GGCGCGGGCA AGCGTTGGAG GCGCTGTCAC CCAGCGAAGT GGAGGATGTC CTCCACTGGC TTGCCGACAT TTCCGACATT ATTGCCGTCA AAACGACTGA AGCCCCTCAC TACCGTCGGG TGGTTATCCA GCGGCGTTCC GGGGTGGACT CGTCTGGGCG TGGGGAACTG TACCGTGAGC TTACCGATGC GGTGGCCGGG TTGCGCGCCA GCCGCACCGA AGCTGGTGCG CTGCGACGCC CACGCCCACC CATTGAAATC AACTCGGGGC GCGGATTCGC GTTCATTGAC CATGTTGGGG ACGTGTACCC CTCCGGTTTC CTCCCCCATC AGTGCGGAAA CGTGAAGGAC CAAGCGTTCA CTGACATTTA CCGCACGTCA CCTATTTTGC GATCACTACG CAACCCAGAT GGCTTTGATG GTAAATGCGG GGTCTGTGAA TTCCACGACC TGTGCGGGGG TTCGCGTTCC CACGCGTACG CTGTCACAGG CAACGCGTTG GCGTCAGACC CCACCTGCGT ATACCAGCCT GCGGGCTGGG TAACCCAGTA A
|
Protein sequence | MSVVDEHRSV RRLHHDAGDR PMITIWEVTR ACALVCQHCR ADAQHRRNPR ELTTEQGKAL LDNIASFGKP FPIVVMTGGD PFERDDLAEL VAHGHAQGLH MALSPSVTPK MTPQRLRELR AAGASAMSLS LDGCCADTHD SFRGVPGVFD RTLDAAAWVR EAGFRLQVNS TVTRKTVHEL PRLLEMMVAM QASLWSVFFL VPTGRGQALE ALSPSEVEDV LHWLADISDI IAVKTTEAPH YRRVVIQRRS GVDSSGRGEL YRELTDAVAG LRASRTEAGA LRRPRPPIEI NSGRGFAFID HVGDVYPSGF LPHQCGNVKD QAFTDIYRTS PILRSLRNPD GFDGKCGVCE FHDLCGGSRS HAYAVTGNAL ASDPTCVYQP AGWVTQ
|
| |