Gene Jden_0044 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJden_0044 
Symbol 
ID8379244 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJonesia denitrificans DSM 20603 
KingdomBacteria 
Replicon accessionNC_013174 
Strand
Start bp52048 
End bp53307 
Gene Length1260 bp 
Protein Length419 aa 
Translation table11 
GC content60% 
IMG OID645002782 
Productfilamentation induced by cAMP protein Fic 
Protein accessionYP_003160026 
Protein GI256831299 
COG category[S] Function unknown 
COG ID[COG3177] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.203132 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGCCAC TTTCGGGATC TCCCCACGAC GCAGACCAAC GCCCTATCGC ACGTATCGCG 
GTTCCCGCCG TGGGGTGGGA AGAGCACCTG TGGATCCCGG GGCCGGGCGA GGGGTTTTCG
AGGTCGGAGT TGCGGCGGCA AACGGGAAGA TACCAGTCGG CAATTCCCGC GCAGTTTTCC
ACCTGGCAAT GCGTTCTTGA TTCGGCGGTT GCTGCTGATG TGGATGAGGC GACTCGCGCA
TTGGTCGCGT TTGATGAGCG AGTTGTGCGC AGACTTGGCA CCGAAGGGGC GGTTCTAGGT
CCGATGAGCG CTATCTTGCT TCGAACGGAA AGTGCGTCAA GTTCTCAAAT CGAGCAGTTG
ACGACCTCTG CCCGCCAACT GAGTCTTGCG GAGTTGGCTC ATCGTTCTAC TCCCCACGCC
CGGTTGGTTG TGGGGAACGT GCGTGCGATG GAAGCGGCAT TGCAGCTTGC GGGTGCTCTT
GACGTGTCGG CAATTCTTGC GATGCACAGT GCACTGCTTG AGCATCAGCG AGACATGGCC
GAACATGCCG GGCGTTTGCG GGAGGTTGTG GTGTGGATTG GTCCTGGTCA TGCGGGTCCG
TTGCGTGCAG ACTTTGTGGC ACCACAACCG CATCGTGTGG AAGGTGCGCT GGCTGATTTG
GTGGCGTTTA TTGGCCGTGT TGACATTCCA CCCCTTGTCC AGATCGCAAT CGCTCATGCG
CAGTTCGAAA CGATTCACCC GTTTGTCGAC GGAAATGGGA GAACTGGTCG CGCGTTGGTC
AATGCGCTGC TTCGTTCTTA CGGGCTCGTG TCGCATGTGA CGGCCCCGCT TTCTGGGGGT
CTATTACGGC GGACCACGGA CTATTTTGAG GCTTTGCAGG CTTTTCGGCG TGGTGATGCT
GGCCCAATTG TGGCGGCATT CGCTCAGGCC GCTCGGTTCG CCGCACACCG CGGCGACCTG
CTTGTCGATG CGCTGGTCAC CGAACTCCAC AACTCACGTT CGTTGCTGGT CGGGCTTCGT
CCGCAAGCTA CGGCGTGGCG TGTCCTTCCG TTACTAGTGG GACAGCCGGT CATCAATAAT
GAGTACGTGA TGACCGCCTT GGGTGTGGGG AAGGTGACCG CGCAACGCGC AGTCGATGCC
TTGGTCGATC GGACCGTGAT CAGGGAGTGT ACGGGCCAAG CGCGGCATCG TGTCTGGCAG
CATGACGGAT TCCTCGGGAT TCTCGATGCG TTTGCCGCCG AACTGAAGCG CGCTCGCTGA
 
Protein sequence
MAPLSGSPHD ADQRPIARIA VPAVGWEEHL WIPGPGEGFS RSELRRQTGR YQSAIPAQFS 
TWQCVLDSAV AADVDEATRA LVAFDERVVR RLGTEGAVLG PMSAILLRTE SASSSQIEQL
TTSARQLSLA ELAHRSTPHA RLVVGNVRAM EAALQLAGAL DVSAILAMHS ALLEHQRDMA
EHAGRLREVV VWIGPGHAGP LRADFVAPQP HRVEGALADL VAFIGRVDIP PLVQIAIAHA
QFETIHPFVD GNGRTGRALV NALLRSYGLV SHVTAPLSGG LLRRTTDYFE ALQAFRRGDA
GPIVAAFAQA ARFAAHRGDL LVDALVTELH NSRSLLVGLR PQATAWRVLP LLVGQPVINN
EYVMTALGVG KVTAQRAVDA LVDRTVIREC TGQARHRVWQ HDGFLGILDA FAAELKRAR