Gene Jden_0043 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJden_0043 
Symbol 
ID8379243 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJonesia denitrificans DSM 20603 
KingdomBacteria 
Replicon accessionNC_013174 
Strand
Start bp51223 
End bp51864 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content64% 
IMG OID645002781 
ProductABC transporter related 
Protein accessionYP_003160025 
Protein GI256831298 
COG category[V] Defense mechanisms 
COG ID[COG1136] ABC-type antimicrobial peptide transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.61103 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.243763 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCATCG ATAGCCACGA CCTGACCGTC ACCATCGACG GGCGCACCAT CATCGACCAC 
GAAAACGTCA CCTGCGAACC CGGGGCCATG ACCGCGCTCA CCGGCCCCAG CGGCTCCGGC
AAAACCACCC TCCTCCACAC ACTTGGGCTA CTCCTACCAG CACAAACAGG GCGCATCGTT
GCTGGTGGGC GCGACGTCAC CGCATACAAC CCGCGGCAAC GCCGCCGCTT CTGGCGCGAC
CACGCCGCGT TCATCCTCCA GGACTACGGC ATCATCGACG ACGACACCGT CGCATTCAAC
GTCACCATGC GCGCACGCAC CAAACGCACC AACCCGGCCA TGCTCGCCGC ACTCGACAAC
ACCGGGCTCC TCGGACGCGA AAACGACACC GCCTCCCACC TCAGCGGCGG CGAAAAACAG
CGCCTTGCAC TAGCGCGAGC GATCTACCGA AACGCACACA TCCTCTACGT AGACGAACCA
ACCGCGTCAC TCGACGCCGC GAACCGCGAC CATGTCATCG CGCTCCTCGC GAACTTCGCG
CACACCGGCG CCACCGTCAT CGCCTCCACC CACGACCCTG CACTCATTGC CGCCTGCGAC
ACCCAACACG TCATGGGTCA TCAAACGCTC GCTGGTGTGT AA
 
Protein sequence
MRIDSHDLTV TIDGRTIIDH ENVTCEPGAM TALTGPSGSG KTTLLHTLGL LLPAQTGRIV 
AGGRDVTAYN PRQRRRFWRD HAAFILQDYG IIDDDTVAFN VTMRARTKRT NPAMLAALDN
TGLLGRENDT ASHLSGGEKQ RLALARAIYR NAHILYVDEP TASLDAANRD HVIALLANFA
HTGATVIAST HDPALIAACD TQHVMGHQTL AGV