Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jden_0043 |
Symbol | |
ID | 8379243 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jonesia denitrificans DSM 20603 |
Kingdom | Bacteria |
Replicon accession | NC_013174 |
Strand | + |
Start bp | 51223 |
End bp | 51864 |
Gene Length | 642 bp |
Protein Length | 213 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 645002781 |
Product | ABC transporter related |
Protein accession | YP_003160025 |
Protein GI | 256831298 |
COG category | [V] Defense mechanisms |
COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.61103 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.243763 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCATCG ATAGCCACGA CCTGACCGTC ACCATCGACG GGCGCACCAT CATCGACCAC GAAAACGTCA CCTGCGAACC CGGGGCCATG ACCGCGCTCA CCGGCCCCAG CGGCTCCGGC AAAACCACCC TCCTCCACAC ACTTGGGCTA CTCCTACCAG CACAAACAGG GCGCATCGTT GCTGGTGGGC GCGACGTCAC CGCATACAAC CCGCGGCAAC GCCGCCGCTT CTGGCGCGAC CACGCCGCGT TCATCCTCCA GGACTACGGC ATCATCGACG ACGACACCGT CGCATTCAAC GTCACCATGC GCGCACGCAC CAAACGCACC AACCCGGCCA TGCTCGCCGC ACTCGACAAC ACCGGGCTCC TCGGACGCGA AAACGACACC GCCTCCCACC TCAGCGGCGG CGAAAAACAG CGCCTTGCAC TAGCGCGAGC GATCTACCGA AACGCACACA TCCTCTACGT AGACGAACCA ACCGCGTCAC TCGACGCCGC GAACCGCGAC CATGTCATCG CGCTCCTCGC GAACTTCGCG CACACCGGCG CCACCGTCAT CGCCTCCACC CACGACCCTG CACTCATTGC CGCCTGCGAC ACCCAACACG TCATGGGTCA TCAAACGCTC GCTGGTGTGT AA
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Protein sequence | MRIDSHDLTV TIDGRTIIDH ENVTCEPGAM TALTGPSGSG KTTLLHTLGL LLPAQTGRIV AGGRDVTAYN PRQRRRFWRD HAAFILQDYG IIDDDTVAFN VTMRARTKRT NPAMLAALDN TGLLGRENDT ASHLSGGEKQ RLALARAIYR NAHILYVDEP TASLDAANRD HVIALLANFA HTGATVIAST HDPALIAACD TQHVMGHQTL AGV
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