| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_0038 |
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| Symbol | |
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| ID | 8379238 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jonesia denitrificans DSM 20603 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013174 |
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| Strand | - |
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| Start bp | 44967 |
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| End bp | 46391 |
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| Gene Length | 1425 bp |
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| Protein Length | 474 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 645002776 |
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| Product | capsular exopolysaccharide family |
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| Protein accession | YP_003160020 |
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| Protein GI | 256831293 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3944] Capsular polysaccharide biosynthesis protein |
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| TIGRFAM ID | [TIGR01007] capsular exopolysaccharide family |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.956003 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.120075 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGAATTGC GCGACTATAT CCGTATTTTG CATAAGAGTT GGGCCTTGAT TGTCGCCATC
ACATTGGCGG GCATGGGGCT TGGGGCTCTG GCAACGATTT TTGCGACTCC GCAGTATCAG
TCGTCAACCC AGTTGTATGT GTCTGTGCGG TCTGAGGGTT CTCAGACGGG CGAGTTGGTT
CAGGGGTCTA CGTTTGCCCG CCAGATTGTT GCTTCGTATG TGGATGTGGT GCGTACGGGC
GTGGTGTTGG ACCCGGTCAT CGAGGAGTTG AATCTCCAGG TGTCTAGTGG TGAGTTGGCA
GAGTTTGTGA CGGCGTCGTC GCCGTTGAAC ACGGTGCTGA TCAATATTTC TGCGACGAGT
TCTGATGCTC AGCAGGCCGC GGATATCGCG AATGCGGTGG GCGAGAGTTT CAAGGATGTT
GTGCAAACGA AGCTTGAGGC TACGAATGCG AGTGGTCAAA GCCCTGTGCA GTTGACGACC
ACGCAGGCAG CATCTGTCGC CCAGGTTCCG ACCAGCCCGA ACCCGAAGTT GAACTTGGCG
CTTGGTTTGT TGGTGGGGTT GGCGTTGGGT GTGGGTGTCG CAATTTTGCG GTCGGTGTTG
GATACCCGTA TTCACTCGTT GCATGACATT GAGCAGATTA CCGAGAAGCC GCTTTTGGGT
GGTATTGCGT TTGATCCGGA CACGAAGACG CGTCCGTTGA TTGTGCATGC TGATCCGCGG
AACCCGCGTG CTGAGTCGTT CCGTTCGTTG CGGACGAACT TGCAGTTCCT CAATGTGGGT
GAGGGGTCGC GGTCGTTTGT GATTACCTCG GCTGGACCGT CGGAGGGGAA GTCGACGACG
TCAGCGAACT TGGCTATTTC GTTAGCGGAG ACGGGCGCCC GGGTGGTCCT TATTGAGGGT
GATCTGCGGT TGCCGAAGGT GTCTGAGTAC ATGGGTGTGG AGACTGGTGC GGGTCTGACT
GATGTGCTGA TTGGTAAGGC TGATTTGGCT GATGTGATGC ACCGGTGGGG TCGCGGGCAG
TTGTATGTGT TGCCGGCGGG TCGGATTCCG CCGAATCCGA GTGAGTTGTT GGGTTCGGCT
GCGATGGACC GGGTGTTGGC GAAGCTGAAT GATGGTTTTG ATTATGTCTT GATTGATGCT
CCGCCGGTTC TTCTTGTCAC CGATGCTGCT GTGGTGGGGA AGAAAACGTC GGGCGTGATT
ATGGTGGTTG CGTCGAGCCG GACCACGAAG CAGGGCTTTG GTGCTGCGGT GCGGACGTTG
GAGACGGCGG GCACAAACAT TTTGGGGGTC ATTGTCACGA TGCTTCCGAC GAAGGGGCCT
GATAGTTACG GTTATGGCTC GTATGGCTAT GGCCATGAGT TGGAGGCTAT TGGCGCGAAG
GAGAAGCGTC GTGGTCGGTT CCGTGGGAAA CGGGGGTCGG CGTAA
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| Protein sequence | MELRDYIRIL HKSWALIVAI TLAGMGLGAL ATIFATPQYQ SSTQLYVSVR SEGSQTGELV
QGSTFARQIV ASYVDVVRTG VVLDPVIEEL NLQVSSGELA EFVTASSPLN TVLINISATS
SDAQQAADIA NAVGESFKDV VQTKLEATNA SGQSPVQLTT TQAASVAQVP TSPNPKLNLA
LGLLVGLALG VGVAILRSVL DTRIHSLHDI EQITEKPLLG GIAFDPDTKT RPLIVHADPR
NPRAESFRSL RTNLQFLNVG EGSRSFVITS AGPSEGKSTT SANLAISLAE TGARVVLIEG
DLRLPKVSEY MGVETGAGLT DVLIGKADLA DVMHRWGRGQ LYVLPAGRIP PNPSELLGSA
AMDRVLAKLN DGFDYVLIDA PPVLLVTDAA VVGKKTSGVI MVVASSRTTK QGFGAAVRTL
ETAGTNILGV IVTMLPTKGP DSYGYGSYGY GHELEAIGAK EKRRGRFRGK RGSA
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