| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_0032 |
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| Symbol | |
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| ID | 8379232 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jonesia denitrificans DSM 20603 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013174 |
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| Strand | + |
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| Start bp | 36984 |
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| End bp | 38447 |
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| Gene Length | 1464 bp |
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| Protein Length | 487 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 645002770 |
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| Product | polysaccharide biosynthesis protein |
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| Protein accession | YP_003160014 |
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| Protein GI | 256831287 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2244] Membrane protein involved in the export of O-antigen and teichoic acid |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.166793 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCTAGGG AAAGCAATAG TGAATCAAAT TTGAGTCACA AAGCACTTAG AGGTGTCAAG
GTTGTGATCA GCGGCCAGGT GTTACGCCTA ATTATTACGG TCACAACGAC AGTAATTCTA
TCAAGACTTC TCTCCCCGAG TGATTTTGGC GTTATGGCTG TCCTTTTAGC GATAGTGGCG
CTAGCGGAAC TGCTTAGAGA TTTTGGCTTA ACCACAGCAG CTTCGCGACT TCCAATAGAC
TCACAAGCGA TAAAAAATTC ACTCTTTATT ATTAATCTGT TTGGTGGTTT TCTAGCTGTT
CCCCTAGTCT ACTTTGTAGT ATCCTTATTA TCCAGGATAA TCGACTTTCC TGAGCTCGGA
AGTGTCGTTC TGTACATACT TCCCGTGTTC GTTTTGAACG GCGCCTCCGC ACAGTTCCGT
GCTGAGATTA ATTCGCGGCT CATGTTTACG AAGTTAACAG TTGTGGATAC AGCACCAGCC
GGGATCGGTT TACTTGTTGC GGTGTCCGCG GCTTACATAA GTCCAGGTTT ATATGTTCTT
GTTCTCCAAC AGGTAGTCGT AGCTTTCTTC GGTCTAGTTC TAGCTGTTAT TCTTTGTGAC
TGGAGGCCTG GTTTTACTTT TGATTTTAGG GGAATAGTAC CTTATTTCAA GTTTGGAGTT
TCGTTATTTG GAACTCAACT TATTGCTTAT TGTACCAAAA ACGCAGATAC AATGTTGTTA
GGCGCTGCTT ACTCTCCTAC TGTTGTCGGT TTCTATAACC GTGCCTATCA GTTACTCATG
GTACCAATGA ATCAAATCAG TGCTCCGCTC ACCAGAGTAT TCGTCCCATA CCTATCCCGA
GTTGCCCAGA AAAAGAGACT GCTAACAGAT CACTTTTATG AATTATCCAA AGGAATGCTA
TTAACTCTAG GTACAGCATA TCTTCTATTT TCCATAAATG CCGAACTGCT TATATCAATA
TTGTTGGGCC CTCAATGGGA TCACGTTGTT ACTATATTCC AAATTCTTGC CATCGGGGGT
ATATTTCGTT GTGCAATGCA AGTTTATTTC TGGGTGTTTC TTGCGATGAA TAAAACCCGC
GATCAACTTG TTTTCTACAC ATGGTCACAA CCTTTAATCG TTTTAACTAT GATTGGTGGA
TTGCCTTGGG GCGCTACAGG TGTCGCGGCT GGGCACACTG TCGGCTATGG TTTGAACGTA
GTTTTATTGA GCTTTGCGGC AGCTCGTTCG TGTGATATTC CTGTCAGAGT TAGCGCTACC
GCTTTTGGTT TGGTTTTCTC ACATATTTAT TTGCCAGGAG TTGTCGTTTC CGCTGGAGCA
AGTCGGTTTA TTCAAGGGAA CGTAAGTTTG CTTTTAGCCT CTATTTCCTC CTTCAGTATT
TTAATCGCTT TGCATATATA TAGAAATAAA CGTTCTTTAA GCACCTTAAG AGGTATTTTA
ACAAGTTCCA AGAAAGGTGC GTGA
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| Protein sequence | MSRESNSESN LSHKALRGVK VVISGQVLRL IITVTTTVIL SRLLSPSDFG VMAVLLAIVA
LAELLRDFGL TTAASRLPID SQAIKNSLFI INLFGGFLAV PLVYFVVSLL SRIIDFPELG
SVVLYILPVF VLNGASAQFR AEINSRLMFT KLTVVDTAPA GIGLLVAVSA AYISPGLYVL
VLQQVVVAFF GLVLAVILCD WRPGFTFDFR GIVPYFKFGV SLFGTQLIAY CTKNADTMLL
GAAYSPTVVG FYNRAYQLLM VPMNQISAPL TRVFVPYLSR VAQKKRLLTD HFYELSKGML
LTLGTAYLLF SINAELLISI LLGPQWDHVV TIFQILAIGG IFRCAMQVYF WVFLAMNKTR
DQLVFYTWSQ PLIVLTMIGG LPWGATGVAA GHTVGYGLNV VLLSFAAARS CDIPVRVSAT
AFGLVFSHIY LPGVVVSAGA SRFIQGNVSL LLASISSFSI LIALHIYRNK RSLSTLRGIL
TSSKKGA
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